Oncorhynchus nerka (sockeye salmon): 115111620
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Entry
115111620 CDS
T07952
Symbol
gtf2h3
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03022
Basal transcription factors
one03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115111620 (gtf2h3)
09124 Replication and repair
03420 Nucleotide excision repair
115111620 (gtf2h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
one03021
]
115111620 (gtf2h3)
03400 DNA repair and recombination proteins [BR:
one03400
]
115111620 (gtf2h3)
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
115111620 (gtf2h3)
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
115111620 (gtf2h3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
115111620
NCBI-ProteinID:
XP_029493729
LinkDB
All DBs
Position
LG27:19187188..19191282
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AA seq
303 aa
AA seq
DB search
MVMASEDEVSLLVIVVDVNPIWWGQQANREPQFTLSKCLDAVMVMGNSHLVMTRTNKLAI
IASHCQESHFLYPCKLWKSGDGHGDDNASTSGDGKYELLSVANDLIAEEIKNLMSRTEVK
GNQTDTLLAGSLAKALCYIHRVTKELEAGQEMKSRILVVKAAEDCALQYMNFMNVIFAAQ
KQSILIDACVLDSDSGLLQQACDITGGLYLKIPQKIALAQYLLWVFLPDSDQRSQLVLPP
PVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKIPLPQVVKSKKKKLK
PST
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggcgtcggaggatgaagtcagtcttctggtcattgttgtggatgtcaatccc
atatggtggggtcagcaagctaatcgagaacctcagttcaccctgtccaagtgtctggat
gcagtcatggtgatgggtaactcccacctggtcatgactaggaccaacaagctggccata
attgccagccattgtcaggaaagtcattttctgtatccttgtaagctctggaaatctgga
gatggtcatggggatgacaatgcatcaacaagtggggatggcaagtatgagttattgtca
gttgccaatgacttaattgcagaagagatcaagaatctcatgtcaagaactgaagtgaag
ggaaaccagacagacacactattggcgggatcacttgctaaagctctctgctatatccat
agagtcacaaaggagctggaagctggacaagaaatgaagtcaaggatattggtcgttaaa
gcagcagaagactgtgccttgcaatacatgaacttcatgaatgtgatctttgctgcccag
aagcagagtatcctaatagacgcctgtgtgttggactcggactcaggtctcctccaacag
gcctgtgacataactggaggattgtacttgaagataccacagaagattgccttggcacaa
tatcttctgtgggtattcctgccagactctgaccaacgctcccaactggtgctgccacct
cctgtacatgtggattacagagcagcatgcttttgccacagaaacctcattgagattggt
tatgtctgctcagtgtgtttgtcaatattctgcaacttcagtcccatctgcacaacgtgc
gagactgccttcaaaattccattgccccaggtggtgaagtcaaagaagaagaaactcaag
ccatcaacgtga
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