Oncorhynchus nerka (sockeye salmon): 115111627
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Entry
115111627 CDS
T07952
Name
(RefSeq) zinc finger CCHC domain-containing protein 8-like
KO
K13128
zinc finger CCHC domain-containing protein 8
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115111627
Spliceosome [BR:
one03041
]
Complex C
Other components
Complex C specific factors
115111627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PSP
zf-CCHC
Knl1_RWD_C
KASH_CCD
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
115111627
NCBI-ProteinID:
XP_029493746
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All DBs
Position
LG27:complement(19347433..19352872)
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AA seq
723 aa
AA seq
DB search
MAEFDFGDCELFEQLEESMPVATHIRFTEEGGEEGSELSERLEECEETIRSLIEENQELK
RKLKVLTRPSGINVENIKIDGPLLQILFANNSISKQCRQEIEDSICSIVQKHQLHGEVEK
GNPSSNVNPQSSSFIMEEDQKTKTCGIKKIKEAFSMVGSVLYFTSFCVDKLGQPLLNDNP
QQTEGWEVPKYQQVFSQVIALDGQEVQMKEKRPKPCCFNCGLDGHQLRDCPQPKDMARIN
EKRKEFSQGNQGHLSNQRYHAEELEERFARYKPGIMSEELMSALGVEMNTLPPHIYRMRQ
LGYPPGWLKEAEMENSGLTLYDGKVSKDGELTEVGHGQSISYDVSKLVDFPGFNISAPPS
VKDDYRLYGSIPIQHNHMKQNFADYLSNNFPMPGANCNKRLHESESTPQQTKKRRSDARS
SDMDVDSDQDSTPRRHRSSDSFQFQPPLPPDSPSFGSPPPLPHGTPPATPTPPPLPKGTP
PPTPTNGSPALRGRTVGVGEESVGGEEEELTLEELEEQQRLIMAALENADTTTNSDSETP
AVGTPLPSSPSVSTPAQVDTETEMEEGEDEEKEGSVEVSSHNSDEQISVDPSSSKCQDDV
EDKGKVVEDESSLLKTPVQEESPMSPEAAADRGNVLAQRPSLLQTPVQQESRQPDPSDQD
NVEGDLSDSVGKVTAVPHRSRFAHGIIPFEDTPEFTEVAEATGTYLRIRDLLKGSPRNMA
KKK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtttgattttggtgactgtgagctctttgaacaattggaagagagtatgcct
gttgctactcacattcggttcactgaggagggtggagaggaaggctctgagctcagtgaa
agattggaggagtgtgaggagacaatccggagtctaatagaagagaatcaagagttgaag
agaaaattgaaagttttgacaaggccaagtggcattaatgttgaaaacatcaagattgat
gggcctcttctacagatccttttcgcaaataatagcatctcaaagcaatgccgtcaagaa
attgaagactccatctgtagtattgttcagaaacatcagctgcatggagaagttgaaaaa
ggaaatccctccagcaatgtcaaccctcagtcttcaagtttcattatggaagaagatcag
aagaccaagacctgtggcatcaaaaagattaaggaggccttcagtatggtgggaagtgtc
ttgtatttcaccagtttctgcgtggacaaacttgggcagcccctgcttaatgataacccc
cagcagacagaaggatgggaggttccaaaatatcagcaggtcttcagccaggtcatcgcc
ttagatggacaggaagtacagatgaaagagaaaagacctaagccttgttgtttcaactgt
gggttggatggtcatcaactgcgagactgtcctcagccaaaggacatggccagaatcaat
gagaagcggaaggagttttctcagggtaaccagggccacctgagcaatcagcgttaccat
gctgaggaactggaggagcgatttgccagatacaaacctggaatcatgagtgaggagctg
atgtctgcactgggagttgaaatgaacactctaccccctcacatctaccgcatgaggcag
ttaggctacccacctggctggcttaaggaggcagagatggagaactcaggtctcacgcta
tatgatgggaaggtgtcaaaagatggagaactaacagaggtcggccatggacaaagtatt
tcctatgatgtttccaagctagtagatttcccaggcttcaatatatctgcaccacctagt
gtgaaggatgactacaggctatatggctctattccaatacagcataaccatatgaagcag
aattttgctgactatctgtccaacaattttccaatgcctggtgccaactgcaataagaga
ctgcatgaatccgaatcaactccccagcagacgaagaaaaggagatctgatgccaggagt
tcagatatggatgttgactcagaccaggatagtacaccccgccgccaccggagctcagac
agcttccagttccagcccccgctgccccctgactcgccatcctttggttcaccacctccc
ttacctcatggtacaccaccagccactcccactccaccccctcttcctaagggaacacct
ccccccacacccactaatggttcaccggctctacggggacgcactgtgggagtgggtgag
gagtctgtaggtggggaggaggaagagctgacactggaggagctggaggagcagcagagg
ctgattatggctgcattggaaaatgctgataccaccaccaacagtgactctgagacacca
gctgttggaacacccctccccagctcgcccagcgtctccacacctgcccaagtcgacact
gaaactgaaatggaggaaggtgaggatgaagaaaaggagggatctgtggaagtttccagc
cacaacagtgatgagcagatcagtgttgatccatcttctagcaaatgtcaggatgatgtt
gaagataaaggcaaggtggttgaagatgagagcagcttgttgaaaacaccagtccaagag
gagagccctatgagtcctgaagctgctgcagatagaggcaatgtgcttgcacagaggccc
agcttgctgcaaacaccagtccaacaagagagccgtcagccagacccctcagatcaggat
aatgtcgagggagatctgtctgactctgtggggaaggtaacagccgtgcctcaccggagt
aggttcgcacatggcattattccctttgaggacacgccagaattcacagaggttgctgag
gctaccgggacataccttcgaatccgagacttgctgaaaggttcccctcgaaatatggcg
aaaaaaaagtga
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