Oncorhynchus nerka (sockeye salmon): 115111652
Help
Entry
115111652 CDS
T07952
Symbol
rubcnl
Name
(RefSeq) protein associated with UVRAG as autophagy enhancer
KO
K25948
protein associated with UVRAG as autophagy enhancer
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115111652 (rubcnl)
Membrane trafficking [BR:
one04131
]
Autophagy
Other autophagy associated proteins
Others
115111652 (rubcnl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
Motif
Other DBs
NCBI-GeneID:
115111652
NCBI-ProteinID:
XP_029493818
LinkDB
All DBs
Position
LG3:49143447..49150657
Genome browser
AA seq
668 aa
AA seq
DB search
MDSQDIKKVVSRGTASPLRKSNNVSWYVDTVPTSPYLSPPHGHCTDTESSGEEKSTGQSS
HDDDDDDEGHIKSNEAPGSYLNREDPSLLTPGDDQYHLPRSSPVISHRRKSLTWHGDTGL
SLSALPPTTVAPLGLSSDPPSTSDRYHLHLTEPPLAAERSTGTVKAESTPCSCPTISQSH
KPRCVSISANLNRLLTSGLHLPFRGSQGPGLDQEEGPRLRSTSDAHPQLVPIKDKRQSDI
THCSADIIKTGCDVDKENAHFIVVDMVLEALEGVKWAVSLSQKSCGAMGNHTEASEDSGA
QIGIHPSKTHSLVSTDSGYEGCGANNRPITRGANMSFKSSLGFPIMRCSAEGLAQQLVCD
FRKQWFPTQELKRGRQSIRTSLQELPGGVCMVSDARLSLSEEIRQRTRMRGTLNWAPPRF
QIIFSVHPTPRRSEVVASQHFLCAGCGTEIEPRYIKKLRYCEYLSKYFCDCCQGGAESVI
PGRVLTQWDFGRYPVSDFSKQLLDSVWHQPLFDLTCVGKTLYSRVRELDRFMDLQEQLLG
IKRLLKACRLSEGVLKEFEQLPDHLTQEPHLFSMDDLLRVKRGQLVPLARAVLRVAIAHV
ESCQVCLARGFICEFCKQKDVLFPFQSETCTRCQVCKACFHKDCFRDEECPKCARIQCRK
KLMDTFCL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggactcacaggatatcaaaaaggtggtcagtcgaggcactgcctctcctctacggaag
tcaaacaatgtgagctggtatgtggacactgtccccacatccccctatctaagtccacca
cacggacactgcactgacacagaaagcagcggggaagaaaagagcacagggcagtcctct
catgatgatgatgatgatgatgaaggacacattaagagtaatgaagcacccgggagttac
ttaaacagggaggacccctctctgctgaccccaggtgatgaccaatatcacctgcccaga
agtagccccgttatctcccacaggaggaagtccttaacatggcatggagatacagggctg
tctctgtctgcattgccccctactactgtggcccctctgggtcttagtagtgacccccca
tcaacatctgaccgatatcatcttcatcttactgagcccccactggcagcagagaggtca
actggtactgtaaaggcagagtctaccccctgttcctgtcctactatatctcagtcacat
aagccacgctgtgtctccatctctgccaacctgaaccgcctgcttaccagcgggctccat
ctgcccttcaggggctcccaagggccagggttggaccaggaggagggtccccgactacgc
tcaacctctgatgcccatccacaattagtgcctattaaggataaaagacaaagtgatatt
acacactgctctgcagacattatcaagactggctgtgacgtggacaaggagaatgctcat
ttcatagtggtggacatggtgctggaggccttggagggggtgaagtgggctgtgagtctg
agtcagaagagctgtggggctatggggaaccatacagaggcctcagaggactcaggggcc
caaatcggcatccacccctcaaagacacactctcttgtttccactgacagtggatatgaa
ggttgtggcgcaaacaatagaccaataaccagaggcgctaatatgtcctttaaaagttcc
ctgggttttcccataatgcgctgctctgctgagggcctagcccagcagctggtgtgtgac
ttcaggaagcagtggtttcccacacaggagctgaaacgcggccgtcagagcatcagaacc
tcgctgcaggaacttcctggaggggtttgtatggtgagtgatgcccgtcttagtctgagt
gaggagatcagacagagaaccaggatgaggggaactctgaactgggccccgccccggttc
cagatcatcttcagcgtccaccccaccccgaggcgcagtgaggttgttgcctcccagcac
ttcctctgtgcaggctgtggaactgaaatagaacccagatacatcaagaagctgcgctac
tgtgaatacctgagcaagtacttctgtgactgttgccaaggcggtgctgagtctgtgatc
ccaggccgggtgctgacccagtgggactttggaaggtacccagtcagtgatttttccaag
cagctgctggactctgtgtggcaccagcctctcttcgaccttacctgtgttggcaagacc
ctttacagcagggtgcgagaactggacaggttcatggacctgcaggagcaactactaggc
attaaaagactgctgaaagcatgcagattatctgagggggttctgaaggagtttgagcag
cttcctgatcacctgacacaagagccacacctgttctccatggatgacctcctgagggta
aaacggggtcagctggtgccgctggccagggccgtgctccgggtggccatcgcccacgtg
gagagctgtcaggtatgcctggctagaggctttatctgtgagttctgcaagcagaaggat
gtgttatttcccttccagagtgagacctgcacacgctgtcaagtgtgcaaggcctgtttc
cacaaagactgcttcagagatgaggagtgccctaaatgtgcacggatccaatgtcgaaaa
aagctgatggacacgttctgcctctag
DBGET
integrated database retrieval system
