Oncorhynchus nerka (sockeye salmon): 115111689
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Entry
115111689 CDS
T07952
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03022
Basal transcription factors
one03420
Nucleotide excision repair
one04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115111689 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
115111689 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115111689 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
one01001
]
115111689 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
one03021
]
115111689 (cdk7)
03019 Messenger RNA biogenesis [BR:
one03019
]
115111689 (cdk7)
03400 DNA repair and recombination proteins [BR:
one03400
]
115111689 (cdk7)
Enzymes [BR:
one01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
115111689 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
115111689 (cdk7)
Protein kinases [BR:
one01001
]
Serine/threonine kinases: CMGC group
CDK family
115111689 (cdk7)
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
115111689 (cdk7)
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
115111689 (cdk7)
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
115111689 (cdk7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Seadorna_VP7
Kinase-like
Haspin_kinase
APH
Motif
Other DBs
NCBI-GeneID:
115111689
NCBI-ProteinID:
XP_029493884
LinkDB
All DBs
Position
LG27:21667114..21673568
Genome browser
AA seq
345 aa
AA seq
DB search
MALDVKSRAKRYEKLDFLGEGQFATVYKARDKTNDTIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELSHPNIIGLLDAFGHKSNISLVFDYMETDLEVIIKDTSLVLTPANIKAFIVM
TLQGLEYMHHHWVLHRDLKPNNLLLDENGVLKLADFGLAKAFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRLPFLAGDSDLDQLSKIFEALGTPTDDTWPGM
SSLPDYVSFKLFPGTPLEHIFSAAGDDLLELLQGLFTFNPSTRLTATQALKMRYFSNRPG
PTPGHQLPRPNSSAEALKEKENLTIGIKRKRDGLETSTIKKKLIL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgatgtaaagtcccgagcaaaaagatatgaaaaactagattttctgggagag
ggtcagtttgccactgtttacaaagccagggacaagaccaacgacaccatagttgccatc
aagaagatcaaagttggacacagaacagaggctaaagatggcatcaacaggacagccctg
cgagagattaaactactgcaggagttaagtcacccaaacattattgggctgcttgatgca
ttcgggcacaaatctaacatcagcttggtgtttgactacatggagacagatctggaggta
atcatcaaagataccagtctggttttgactccagccaacatcaaagcattcatagtgatg
actctacagggcctggagtacatgcaccaccactgggttctgcacagggatctgaagccc
aataacctgctgctggatgagaatggtgtgttgaagctggctgattttggattagctaaa
gccttcggcagccctaacagagtctacactcaccaggtagtcaccaggtggtatcgttct
ccagagttgttgttcggtgccaggatgtatggggtgggcgtcgacatgtgggctgtgggc
tgcatccttgcagagctcctcttaaggttacccttcctagctggagactcagatctggac
cagctgagtaagatctttgaagctctggggactccgacagatgacacctggcctgggatg
agtagtctacctgactatgtgtcgtttaagttgtttcctggtactcctctggaacacatc
ttcagtgctgcaggagacgacctcttagagctactacagggtctattcaccttcaaccct
tccacacgccttacagctacacaggctctaaagatgaggtacttcagtaacagaccaggt
ccgacccccgggcaccagctgccccggcccaactcatcagcagaggctctcaaagagaag
gagaacctcaccatcggaatcaagaggaaacgagacggactggagacgagcaccataaag
aagaaactgatactgtga
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