Oncorhynchus nerka (sockeye salmon): 115111725
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Entry
115111725 CDS
T07952
Symbol
edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115111725 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
one04050
]
115111725 (edar)
Cytokine receptors [BR:
one04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
115111725 (edar)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
DUF4501
SCIMP
TNFR_c6
RIFIN
Motif
Other DBs
NCBI-GeneID:
115111725
NCBI-ProteinID:
XP_029493940
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All DBs
Position
LG3:49519547..49570019
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AA seq
481 aa
AA seq
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MFQKGSHIESLFLCLLLVSCPPCLRSEYSSCGEFEFYNQTFSSCRPCPPCQPGQEPHMNC
GYGTKDENFVCVSCPAGKYSKGKYEICRRHKDCEGLYRATVLTPGTPDSDADCGPCLPGY
YIQENRPRNLYGMVCHSCQNAPRNTKECMLTKVASVSTSSTTMFPHPHKDATGQGHLATA
LIIAMSTIFIMAIAIVLIIMFYILKAKPSGQACCSGQVVKAVEAQTNKQEDKKDVPDNVV
IFSEKDEFDKLKPTPPKTVKSENDASSENEQLLSRSMDSDEEAALERQGAADPNPSLCLL
NLGNKPDLCLLSLGLLDRDKTGSNPTSPINANNISNGNANIINNNNYNKATGIQSRRKKI
LDLYARACSVAEGLSPTELPFDCLEKASRMLSSSYSSEAAVVKTWRHLAESFGLKRDEIG
GMSDGLQLFERISTAGYSIPDLLTRLVQIERLDAVESLCSDVLGGGDTHTVPLSSPRCAS
V
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagaaaggaagtcacatagagtccctcttcctctgtttgttgttggtgtcctgt
cctccctgtctcaggtcagagtacagtagttgtggagagtttgaattctacaaccagacc
ttcagtagctgccggccctgccccccatgccagcctggacaggagccccacatgaactgt
ggctatgggactaaggatgagaactttgtgtgtgtgtcttgtcccgcggggaagtactca
aaggggaagtatgagatctgcaggagacataaggactgtgaaggtctgtaccgcgctaca
gtactcacacctgggacaccagacagtgacgcagactgtggaccctgcttacctgggtat
tacatccaggagaaccggcccaggaacctgtatgggatggtctgtcactcgtgtcagaac
gcaccgcgcaacactaaagagtgcatgcttaccaaagtcgccagtgtctcaaccagcagt
actaccatgttccctcaccctcacaaagacgccacaggacagggtcacctagcaaccgct
ctcatcattgccatgtcaaccatcttcatcatggccatcgccatcgtcctcattatcatg
ttctacatcctcaaagccaagcccagcggacaggcgtgctgctcaggtcaggtggtgaag
gctgtggaggctcagaccaacaaacaggaggacaagaaagatgttccagacaacgttgta
attttctctgaaaaggatgaattcgacaaactcaaacccacgcctccgaagacggtgaaa
agtgagaatgatgcatcgtcagagaacgagcagctgttgagtcgtagtatggacagtgat
gaggaggcagcgttggagaggcagggggcggctgatcctaaccccagcctctgtcttctg
aacctgggcaacaagccggacctctgcctgctctctctggggcttctcgacagggataag
actggatccaaccccaccagccctatcaacgctaacaacattagcaatggcaatgctaac
atcatcaataacaacaactacaacaaggctacagggattcagagccggaggaagaagatc
ctggatctgtatgctagagcctgcagtgtagccgagggtctgagtcctacagaactaccg
tttgactgtctggagaaggccagtcggatgctgagctcctcctacagtagcgaggcagcc
gtggtgaagacctggagacacctggcagagagctttggcctgaagagggatgagatcgga
gggatgagtgacggcctgcagctgtttgaaaggatcagtaccgccggctatagcatccca
gacctgctcaccagactagtgcagatagagagactggatgctgtggagtcactgtgttct
gatgtactgggaggaggagacacacacactgttcctctgtcctcaccacgctgtgcaagc
gtctga
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