Oncorhynchus nerka (sockeye salmon): 115111824
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Entry
115111824 CDS
T07952
Symbol
fancc
Name
(RefSeq) Fanconi anemia group C protein isoform X1
KO
K10890
fanconi anemia group C protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
115111824 (fancc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
one03400
]
115111824 (fancc)
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
115111824 (fancc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_C
Motif
Other DBs
NCBI-GeneID:
115111824
NCBI-ProteinID:
XP_029494150
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All DBs
Position
LG27:28435609..28475542
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AA seq
582 aa
AA seq
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MSQAQMGSMAGLKPQEVAFWLGKAVEWGQTESPDTQRDTSLHLGPLRAFLQLLLTDIHMR
SSTTETMRTIPFVGQFLGRLCWNPYVTVDAESRSLLLQSLWSLYSEEPHNAVERKANQWI
RNVLCQLATEEENSATHMLVKHMGLSPKEYNVKVLRKMVWLLVEEVGESCSSLADPNQRC
SCDSVLAASVACVPLVTCPETAPLIGALLQRPVTCDKAALSQDFLDAVSSAYSRKCVSLE
AQAVVSLWCHNLASLEGAVMSLLDSVLSNPASNPHNLESTITHSLLPKACSQHGSIFLIV
NDIFRSMLVQVEGNQTLLSLIHTFTICFLGELAALQPQECVSLKAFFPHTPQSLLAPLLT
HPSEMAQEAWPEHLAWITASLQRLTEEEEEEEGNRGQCGVFEAWFLLVQCADWLEVANQL
LVSARPQDCGPLLWLLTFYHHPTNRGHHRTQQLVAAREVWDHLRSLFLLSAPPLPADRLQ
SLAELMSAVPQQPSLDSLLVVSLLGNFAVFSHNPLSGAREIVRMVVQRSGLVREAVCVLD
MVELRLNRERASSSLTDRVTLRTRALRGTLTHMAQHDTQPLW
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaggcccagatgggatccatggctggcctaaagccccaggaggtagccttctgg
ctaggaaaggcagtggagtggggccagactgagagcccagacactcagagagacaccagc
ctccacctgggccctctcagggccttcctccagctcctcctcacagacatacacatgcgg
agctccaccacagagaccatgaggactattcccttcgtaggccagttcctcggccgcctc
tgctggaacccctatgtcactgtggatgctgagagccgctcactcctgctccagagtctg
tggagtctgtattcagaggaacctcataacgctgttgagaggaaggccaaccagtggata
cggaatgtgttatgtcagcttgctacagaagaagagaacagtgcaacacatatgttagtg
aaacatatgggcctgtcaccaaaagaatacaatgtaaaggttctaagaaagatggtgtgg
ttgctagtggaggaggttggggagagctgcagcagtttggctgaccctaaccagaggtgt
tcgtgtgacagcgttcttgctgcatcagtggcatgtgtccccctggtcacatgtcctgag
actgctcctctcattggtgcgttgctgcagcggccggtgacctgcgataaggcagccctc
agccaggacttcctggatgctgtaagctccgcctactccagaaagtgtgtgtctctggag
gcccaggcagtggtgtctctgtggtgccataacctggccagcctagagggggcagtgatg
tctctactggactctgtgctctccaacccagcctccaacccgcacaacctagagagcacc
atcactcactcactactgcctaaagcctgctcccagcacggctccatattcttaatagtg
aacgacatcttcaggtccatgctggtgcaggtggagggaaaccagactctgctatctctt
atccacaccttcaccatctgcttcctcggggaactggcagccctgcagcctcaggagtgt
gtgtccttgaaggccttcttcccacacacaccccagagcttactggcccctctgctgacc
catccttcagaaatggcccaggaggcgtggccagaacacctggcctggatcactgcatca
ctacagagactcactgaggaagaggaggaagaggaaggcaacaggggtcagtgtggagtg
tttgaggcctggttcctgctggtgcagtgtgctgactggttggaggtagccaaccaacta
ctggtctcagccagacctcaggactgtggccccttgctgtggctcctcaccttctatcac
caccctaccaacagggggcaccaccggacacagcagctggtggcggccagagaagtctgg
gatcacctgaggtcactcttcctgctctcggctcctccccttcctgctgaccgactgcag
tcattggccgagctgatgtcagccgtcccccagcagccgtccctggactcgctattggtc
gtcagcctcctgggcaactttgcagttttctcccacaaccccctgagtggtgccagggag
atagtccgcatggtggtgcagcggtcagggctggtccgtgaggcagtgtgtgttctcgac
atggttgagctccgactaaacagagagagagcctcctccagcctcactgacagagttacg
ctcaggaccagggctcttcggggcacactcacacacatggcacagcacgacacacagcca
ctatggtag
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