Oncorhynchus nerka (sockeye salmon): 115111852
Help
Entry
115111852 CDS
T07952
Name
(RefSeq) lipoxygenase homology domain-containing protein 1-like
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115111852
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115111852
Cilium and associated proteins [BR:
one03037
]
Other cilia and associated proteins
Stereociliary proteins
115111852
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Other domain-containing proteins
Others
115111852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
DUF7755
Motif
Other DBs
NCBI-GeneID:
115111852
NCBI-ProteinID:
XP_029494200
LinkDB
All DBs
Position
LG27:complement(29395693..29434865)
Genome browser
AA seq
2269 aa
AA seq
DB search
MGSKDKKSKDDEKKSKKDKKEGEQTREQGDEEGDGKKKKKKAKKGSGGDSDEDTKKGKGK
KKKLVENYVEIYENELRNYEPDTMENYEDEYHKKKVYEVVTITGDERGAGTDANVFITLF
GEYGITPKVHLASNTEKRSRTAFEKNKTDVFRIKTHNVGPLKKIRIEHDNTGLNASWFLD
RVVVTDITRPHLRFYFTCNNWLSKVEGDNLFVRDLLGSLDPMDLPKYNKYVVSVFTADVK
GSGTDADVFINIFGEFGDTGERRLDNKNDNFEKSTEDKFTLEAPHLGKIRKITLGHNNKG
SSAGWFVDKVLLDDMGNKSLYEFPINRWFAIDEDDGKIQRDILVGGSEPTGIVYHVQVVT
GKVRGAGTNSNIHMLMHGTKGLKNSGKIFLQGGKFERGLTDIFNVEISALLSPLSRVTIG
HDNGGVSAGWYCEKIVVFCPFTGIEQTFPCSKWLDESEGDGLIERELYEMVSLRQRKQKK
HPWSLWIWTSDLPGAGTDASVYFQIYGEKGKSDEMRLDNKADNFEQGQLDKFMVELPDLG
KLTKCRIWHEKRSPFAGWHLSKASLMKTLTKEKFKFPCERWLDTNEDDNELVRELPATGN
LIAEPLPLIKYRVTVCTGKFGGSGTDATVFLNLIGDLGDTGERTLVNCKNNVNKFEKGNM
DEFIIEAVSIGQVRRVRIGHNGRGGGCGWYLEKVMVREEGQAESQVVEFPCGRWLDRNED
DGQIVRELVPFSDGQRLYNVSYHVSVKTGSVSGGSSNSTVFVKLYGEKGDTSKMMLVVSD
NNLRNYFEVGRVDVFTVETFDIGQISRLMIGHNNEGMNAGWFLDSVQIMVPASGSQYMFP
SHRWLCKDEADGKTEVVIYPSEILDIKQLINYEITVVTGDVSFAGTNANVFIQIYGGKGK
TEVVNLASRSNNYERATTEIFKIEASNVGKIFKVRIGHDEAGIGSGWFLEKVYVKHLIMG
MVTKAKKKDDKKKKKKKKEAEEETEEVMQEIVQTYVFPCSRWLSRGEEDGELVVELLPED
TNQLEENTYEVCVFTGDMLGAGTDANVYINIYGENGDTGERLLRKSGNLNKFESGQEDVF
TITAIELGPLRKLRIRQDNAASYSSWYLDRVEIVDTKDDTTYYFPCNRWLAVDEDDGQIA
RELVPVDEAFMKRDDDEEGTGAATLGLEQKAMSTTLALKIKTGEKKHAGTDANVFAIIYG
EKDDTGIINLKACKTHKNKFEQGMVDEFTVEAVDLGELEKLRIGHDNSGGSPGWFLDWVE
IDAPSQGQRLRFPCGRWLDNGEDDGAIVRDLYPNELQTELYMPFVPYEIKMYTSDVFGAG
TDADVFIVLYGWKGLCTQQKHLCVNKRERRLFFERGAEDMFIVELEDVGDVIEKIRIGHD
NSGTNPGWHLDRVEIRRLLRKGKGSETTILPCERWLAKSEDDGETVRELVPSDIITEKLL
KEGKLKHTEMEVEDALETHTYKVSVRTGDMYGGGTDAKVFLTIYGDLGDTGERKLSKSES
NRNKFERGAVDKFSIEAVDLGQVFKIRIRHDNSEFMGTDWYLDQVEVMDMETEEVYMFLC
ERWLSKKKEDKRIERTFYIKDYEGERNVDPNKKSTQAKTGLDRNANKKKKKKAVVEEGPV
IPYHFTVSTAMDPDASTTARVYVIVMGPNDIETERLWLDLPEGKKSFAAGTMENFQCYGT
DVGEIKRVELGHNGATPESCWLVDELSVAVPTKGIKYIFQCKCWLAKDRGDGLTGRLFNV
LDANSINIVRKIIYVATVITGDTQDAGTDTNIFLSVFGANGSTEEMLLPKHEDRFERGQE
DTFNLEIDDIAPLKKIRVRIDGSGSRPDWFLDRIVMHNLTTEEVSVFTNENWLSKTKGPK
RTKICELAAVVDEEEMVERTTYIIQVQTSDIGGAGTDANVFLIVFGENGDTGTLALKEGG
SRNKFERKSKDVFRFPDILSLGELSKIRVWHDNKGPAPGWHLEYIDVKDETMDQNFRFPC
GRWLAKNVDDGQIMTELACANNDILDFSDKTKYEIATTTANTDDADTKENVWIVLEGKRG
RSKEFVLENSSKKKRFLCGATDTFEFSSKHVGEIAGICVGHTTKDSKKVKGEAFWHVLEV
VVTEKGLGNKYLFHCDAQIPLAAKRDKFLTFECFKTIESFASKVRSLVPVKYEIIVITGD
VKRAGTDSNVYITIYGSNGDSGKRSLKQKFRNLFERGQTDHFILEMLDLGELLRVKVEHD
GSSHNSGWYLECVEVTNTANSVTTIFLCGKWLDPQKADGQIQRVLYPKY
NT seq
6810 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaaaggacaaaaaatctaaagacgacgaaaaaaaatccaaaaaggacaagaaa
gagggcgaacaaactcgcgaacagggggatgaagaaggggatggcaaaaagaagaagaaa
aaggccaagaaaggctcagggggggacagtgatgaggacaccaaaaaggggaaaggcaaa
aaaaagaagctggttgagaactacgtggagatctatgagaatgaactacggaactatgag
ccagataccatggagaactatgaggatgagtaccacaagaagaaagtttatgaggtggtg
accatcactggagatgagaggggggcgggcaccgatgccaacgtgtttatcactctcttc
ggggaatatggcatcactccgaaggtgcatctggctagcaacacggaaaagaggagtaga
acagcctttgagaagaacaaaacagacgtctttaggatcaaaactcataacgttgggcct
ttgaagaagatacggatagaacatgataacacaggtctgaatgccagctggttcttggac
agagtggtggtgactgatattacaagacctcacctgaggttctacttcacctgtaataac
tggctcagtaaggtggagggggacaacctgtttgtcagggatctgctgggcagcctcgac
cccatggacttgcccaaatataataagtacgtagtgagcgtgttcacagcagatgtaaaa
ggcagtggaacggatgctgatgtcttcatcaacatctttggagagtttggtgacaccggt
gagaggcggttggacaataagaatgataactttgagaaaagcacggaggacaagttcact
ttagaagctccccaccttggcaaaattaggaagattaccctgggtcacaacaacaaaggc
tcttccgctggatggtttgtggacaaggtgctcctggatgacatgggaaacaagtctctg
tatgagttccccatcaaccgctggttcgccatcgatgaggatgatgggaagattcagagg
gacatcctagttggaggcagtgagcccacaggtattgtgtaccacgtccaggtggtgaca
gggaaggtccgaggagctggcaccaactccaacatccacatgctgatgcacggcaccaag
ggcctgaagaacagcggcaagatcttcctgcaggggggtaagtttgagcgtggtctgacg
gacatctttaacgtggagatatctgccctcctcagccccctcagccgagtcaccatcggc
cacgacaatggaggagtcagcgctggctggtactgcgagaagatagtggtgttctgcccg
ttcacagggattgagcagaccttcccttgcagtaaatggctggatgagagtgaaggtgac
ggactgatagagagagagctctatgagatggtctcactaaggcagaggaaacagaagaag
cacccctggtctctgtggatctggacgtcagatctccctggagcaggaacagacgcatcc
gtttacttccagatctatggggagaagggcaagtcagacgagatgagactggacaacaaa
gcagacaactttgaacagggccagctggataagttcatggttgagctacctgacttgggg
aagcttacaaaatgtcgcatctggcatgaaaagagaagcccttttgcagggtggcatttg
agcaaggcatctctgatgaaaactttgacaaaggagaagtttaagttcccctgtgagcgc
tggctggatactaacgaggatgacaacgagttagttagagagctgcctgccactggaaac
ctgattgctgaacccctgcccttgataaagtaccgtgtgactgtgtgcacggggaagttt
ggcggcagcgggacggacgccactgtcttcctcaatctgattggtgacctgggggacaca
ggcgaacgtacgctggtcaactgcaaaaacaacgtcaacaagtttgagaaaggcaacatg
gatgagttcattattgaggcggtgtcaatcgggcaggtgcggcgtgtgcgtatcgggcac
aacgggcggggcggaggttgtggctggtacttggagaaagtgatggtcagggaagaggga
caggctgagtctcaggttgtagagttcccctgcggcaggtggctagatcggaatgaggat
gacggacagattgttcgggagttggtgccattttcagacggccagcgtctttacaatgtt
agctatcatgtgtcggtgaagacaggcagcgtcagtggaggcagctcgaactccaccgtt
tttgtgaagctgtatggggagaagggagacaccagtaagatgatgctggtggtctctgac
aacaacctgcgcaactactttgaggtgggccgggtggatgtgttcactgtggagacgttt
gacattggacagatcagccgtctgatgattggccacaacaacgaggggatgaatgctggt
tggttcctggacagtgtccagatcatggtgccggccagtgggagtcagtacatgttcccc
agccaccgctggctctgtaaggacgaggcagacggcaagaccgaggtggtgatctaccct
agcgagatcctggacattaaacaattgataaactatgagataacagtggtgacaggtgat
gtgagctttgctggaaccaacgctaatgttttcatccagatctacggtggtaagggcaag
acagaggtcgtcaatctggccagcaggtccaacaactatgagagagcaactactgagata
ttcaagatagaagccagcaacgtaggaaagatcttcaaggtgcgtatcggccatgatgag
gcggggatcggctccggctggttcctagagaaggtatacgtcaaacacctaatcatgggc
atggtgaccaaggcgaagaaaaaggatgacaagaagaagaagaagaaaaagaaggaggcg
gaggaggagacagaggaagtgatgcaggagatagtgcagacatatgtgttcccctgctcc
cgctggctgagccggggggaggaggacggggagctggtggtggaactgcttcctgaggat
acaaaccagctggaagagaacacctatgaagtgtgcgtcttcaccggggacatgctgggg
gctgggactgacgccaatgtctacatcaatatttatggggagaacggggacacaggggag
cgcctcctcaggaagtcaggcaacctcaataaatttgagtcagggcaggaggatgtgttc
accataacagccattgagctgggccccctgcggaagctacgcattcgtcaggacaacgca
gcgtcttactcctcttggtacctggatcgcgtggagatagtggacaccaaggatgacacc
acgtactacttcccatgtaaccgttggctggcggtggatgaggatgatggacagatcgcc
agggagctggtgcccgtggatgaggccttcatgaagagggacgatgatgaggaggggaca
ggtgcagctaccctggggcttgagcagaaagctatgtctacaactctagccctgaaaata
aagacaggagagaagaaacatgctggaacggatgccaatgtttttgctatcatttatgga
gaaaaagatgatacagggataatcaacctgaaggcgtgtaagacccataagaacaagttt
gagcagggcatggtggatgaattcactgtggaggctgtggacctgggagagctggaaaag
ctacgcatcggccatgacaactcaggtggctctcctggttggtttctggactgggtagag
atcgacgccccctctcagggccagagactccgtttcccatgtggccgttggctagataat
ggagaggatgatggggccatagtgagagacctgtaccccaacgagctccagactgaactc
tacatgccatttgtcccctatgagatcaagatgtatacaagtgatgtgtttggtgctggg
acagatgcagacgtgtttatagttctttacggctggaagggcctctgcacccagcagaaa
cacctgtgtgtcaacaagcgggagagaaggctgttcttcgaaagaggagctgaggatatg
tttatcgtggagttggaggatgtgggtgatgtaattgagaagatccgtattggacacgac
aacagcggcaccaaccctggctggcaccttgacagagtggagatcagacgcctactcagg
aagggaaagggttcggagacgaccatcttaccgtgtgagcgctggttggccaagtcagag
gacgatggggagacggtgagagagctcgttccctctgatattatcacagagaaactgctg
aaggaaggaaaactgaaacacacggagatggaggtggaggatgcccttgaaactcacacc
tataaggtgtctgtgagaacgggtgacatgtacggaggagggaccgacgccaaagtgttt
ctcaccatctacggagacctgggagacacgggggaacgcaaactcagcaagtctgagagc
aacagaaacaagtttgaaagaggggcggtggataagttctccatcgaggcggtggatctt
ggccaggtgtttaagatccgtattcgccacgacaactccgaatttatggggacagactgg
tacctggaccaggtagaggtgatggacatggaaacagaggaggtatatatgttcctgtgt
gagcgttggctttccaagaagaaggaggacaaacgcatcgagagaaccttctacatcaag
gattatgagggtgagaggaatgttgatccaaacaagaagagcacccaggccaagacaggg
ctggacaggaatgcaaacaagaagaagaagaaaaaggcggtcgtagaggaaggtccagtc
atcccctaccacttcactgtgtctactgctatggaccctgacgccagcaccacagccagg
gtttatgtcatcgttatgggacccaatgacattgagacggagcgtctgtggctggacctg
cctgaggggaagaagagcttcgccgcagggaccatggagaacttccagtgttacggaact
gacgtgggagagatcaagagggtggagctgggtcataatggggcaaccccagagagctgc
tggttggtggacgagctgtcggttgctgtgccgaccaaaggcatcaagtacatcttccag
tgtaagtgctggttagccaaggacagaggcgacggtctcaccggcagactgttcaacgta
ctagatgccaacagtatcaatattgtccggaagatcatctatgtggccacggtcatcaca
ggcgacacccaggatgcagggacggacaccaacatcttcctgtctgtgtttggagccaat
gggagcacagaggagatgctgctgcccaagcatgaggacaggtttgagagaggtcaagag
gacacgtttaacctggagatagatgacatcgctcctctgaagaagatcagggttcgcatc
gacggctctgggagtcgccctgactggttcctcgacaggatcgtgatgcataacctgacc
acagaggaggtgtctgtgtttaccaatgagaactggctgtcgaagaccaaagggcccaaa
aggactaagatctgtgagctggcagcggtggtggatgaggaggagatggtggagaggacc
acctacatcatccaggtccagaccagtgacatcggaggcgcgggcactgatgccaacgtg
ttcctgatagtgtttggggagaacggagacactggtacgctggcactaaaggagggaggt
agcagaaacaagtttgagcggaagtcaaaagatgtgttccgcttcccagacatcctcagc
ctgggagagctttccaagatccgcgtatggcatgacaacaagggtcctgctccgggttgg
cacctggagtacattgatgtgaaagatgagaccatggaccagaatttccgtttcccatgt
ggccgctggctggccaagaatgtggacgacgggcagatcatgacagagctggcctgtgcc
aacaacgacatcctagacttcagtgacaagaccaaatatgaaattgccacaacaacagct
aacactgatgacgcagacaccaaggagaatgtgtggatcgtgctggaaggaaagagggga
cgttcaaaggagtttgtgctagagaatagttcaaagaaaaagaggttcctttgtggagcc
acagacacgtttgagttttcctccaagcatgtgggtgagatagctggcatctgtgtgggg
cacacgactaaagacagcaaaaaggtgaagggtgaggccttctggcacgtcctggaagtt
gtggtgacagagaagggacttggaaacaagtatttattccactgtgatgcccagatccct
ctagcagccaaacgggacaagtttctgaccttcgaatgctttaagaccattgagagcttt
gccagcaaggtccgcagcctcgtgcccgtcaaatacgagataatcgtcatcaccggcgac
gtcaaaagggccggaactgactctaacgtttacatcaccatatatggctccaatggggat
tctggaaagcgttccttaaagcagaagttccgaaacctttttgagcggggacaaacagat
cattttattctggagatgttggatttaggggagctgctgagggtcaaagttgagcatgat
ggctcaagccacaactctggttggtacctggagtgtgtagaggttaccaacacagccaac
tcggtcaccactatcttcctgtgtgggaagtggttggatcctcagaaggcagatgggcag
atacaaagagtgctctaccccaaatactga
DBGET
integrated database retrieval system
