Oncorhynchus nerka (sockeye salmon): 115111907
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Entry
115111907 CDS
T07952
Symbol
fbxw8
Name
(RefSeq) F-box/WD repeat-containing protein 8 isoform X1
KO
K10264
F-box and WD-40 domain protein 8
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115111907 (fbxw8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115111907 (fbxw8)
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
115111907 (fbxw8)
Cul7 complex
Target recognizing subunit
115111907 (fbxw8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
WD40_CDC20-Fz
WD40_WDHD1_1st
F-box
Beta-prop_SCAP
WDR55
WD40_Prp19
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
115111907
NCBI-ProteinID:
XP_029494305
LinkDB
All DBs
Position
LG27:complement(33283540..33323326)
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AA seq
664 aa
AA seq
DB search
MAEDELLAFREHWKQELTIKNEAHSNCNVTLQPSREDSKLKRYFEDFGQNRSEPEKRQDS
TSQGNSKGGQDAFLSAAKTPKEDQPEYVSIAEGLLDGRTSPLLERIQEERTRRKRQYHSL
TSACNTSSQQQPQRKINTGDKLVDQLIQDLNETNDIPFFDIELPYELALKIFQYLSRTEL
GRCAQVSKAWGVLAEDEVLWFRMCQTEGYHHGASVSDSPCWKSMLRDCRNSENTVRSNWK
NRVGSISQLQYELGKVLCDVSSCDSYVVAGYTSGDVRLWDTLHWDSAASFLKPSPLTADV
TPRPHVSHIRVNNTVAVAAYDDGCVDVWSTETGQEPVHHFQIPGRVHALALSLESPTLAT
AAGLDVRLDQPDERGYWRTLCQATLPKPRLWSQVESMVVVPWAGGRGGDSVPLVALSAGE
TVFLLAPEDLEPRVLHTVYGHPITCLDASASHAALGVKSCGWAMNDGGNKIHVYSLETGQ
SEMSVGNSAGDFSCVNLRDSPPHMLICGNKDRRVRVFDLRTGSSVTSLYAHHMGVTSVQA
DDWKIVSGGGEGLVCVWEMRMGAKLWEMHNRHPVRHLRFNTSTLVTANIPDEKSPRGACI
TDDDLTAHRRHRGVICHYDFSEDSTSQDHVLPICRSNYVESSGYNYNIGLAVPYDILSGS
HPSH
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagacgagcttctggcgttcagagagcattggaagcaagaactgacgattaaa
aacgaggcgcattcgaactgtaacgttactcttcaaccaagtcgggaagactctaaatta
aaacggtactttgaagattttggtcagaacagaagtgaaccagaaaaaagacaggattcg
acatcacaggggaacagtaagggaggacaggatgcatttttgtctgcagcaaaaactcca
aaggaggaccaacccgagtatgtgtcgatagccgagggcttgctagatggaaggaccagt
cccttgttggagaggatccaggaggagaggactcgaaggaagagacaataccacagtctg
acaagcgcctgtaacacctcctcccaacaacaaccccagaggaaaattaacacgggtgac
aaattagtggatcaattaattcaagacctgaatgagacaaatgacattcccttctttgac
attgagttgccctacgagttagctctgaagatcttccagtacctcagtcggacagagctg
gggcgatgtgctcaggtgagcaaggcgtggggggtcctggcagaggatgaggtgctgtgg
tttaggatgtgtcagacagagggttatcaccacggggcctctgtttctgactccccctgc
tggaagagcatgttacgagactgcaggaactctgaaaacactgtgcgctccaactggaag
aatcgtgttggatcaatcagccaactgcagtacgagctggggaaagtgttgtgtgatgtc
agttcctgtgacagctatgttgttgctgggtacacgtcaggggacgtgagactgtgggac
accctccactgggactctgcagcctccttcctaaagccaagccccctgacggcagacgtc
acccccagacctcacgtcagtcacatccgggtcaacaacactgtggctgtggctgcctat
gacgatggatgtgtggatgtgtggagcacagagacgggacaggagcctgtccaccacttc
cagatccctgggagggtccacgccctggctctgagcctggagagccccaccttggctact
gctgctgggctagatgtccggctggaccagcctgatgagaggggctactggaggaccctc
tgccaggccacgctacccaaacctagactctggtcccaggtggagtctatggttgtggtg
ccatgggccggggggcgaggaggggacagtgtccccctggtggccctgtctgctggggag
acagtgttcctgctggcccctgaggacttggaaccccgggtgctccacaccgtctacggc
caccccatcacctgtctggatgcctcggcctctcacgctgccctgggggtcaagagctgt
ggctgggccatgaacgatggaggcaacaagatccatgtgtacagcctagagacgggccag
tcagagatgtctgtggggaactcggcgggagacttctcctgtgtcaacctgagagacagc
cctcctcacatgctcatctgtggaaacaaagataggagggtgagggtgtttgacctgcgc
accggctcctctgtcacatcgctgtatgcccaccacatgggcgtgacctccgtgcaggca
gacgattggaagattgtgagtggcggaggtgagggattggtctgcgtctgggagatgagg
atgggagctaaactgtgggagatgcacaacaggcacccagtcagacacttgagattcaac
actagcactctggtgacagccaacatcccagacgagaagtctccacgaggggcctgcatc
acagatgacgacctcacagcccaccgcagacataggggagtgatttgccactatgacttc
tcagaggactccacctcccaggaccatgttctgcccatctgcaggtccaactatgtggag
tcatctggctacaactacaacattggcctggccgtgccctatgacatcctgtctggttct
cacccctcccactga
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