Oncorhynchus nerka (sockeye salmon): 115111934
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Entry
115111934 CDS
T07952
Symbol
apba1
Name
(RefSeq) amyloid-beta A4 precursor protein-binding family A member 1 isoform X1
KO
K04531
amyloid beta A4 precursor protein-binding family A member 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115111934 (apba1)
Membrane trafficking [BR:
one04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
115111934 (apba1)
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
115111934 (apba1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
115111934
NCBI-ProteinID:
XP_029494346
LinkDB
All DBs
Position
LG27:complement(35177543..35280572)
Genome browser
AA seq
1028 aa
AA seq
DB search
MNPEEVEHGQELIEHVEADLPPPQCRHHDNHIATNNGRPRQPSNHSSENNNHPAPRYRRY
NEVPGAGGSRVRGAPQRRSTEEPEAELHLGAQSPPQPQQQQQAQGQSQPILRPAVTRYRR
QGDSEARLRAQQQRHIQRQQREAERVHQQQQQPLPAPQPVHSLPPEREEPEEDEEERGRY
RERETEGDNSALGRSASTESAFHTHTDRAEGDCVMALDLEAEDEGGTYEVMLRPEAEGYT
ESAESEQHHPHPQPNLNLNYPPQPPPLPREPLPDVGRPHSQEEAEETLNPGGGYSNYVYT
QPLNLHGGGARVPGGQDSSVEEGMEPKDEAYSEAYHYSLTEHVYEEISDAPSAAAAEGAT
PTNANENLQQRKAAFRLFEGGDGGGDYWQQEAVGSRLHHYDERSDGESDSPEKEAEFAPY
PRADSCDQDGEEDINMIVTEVRESSSSQSLERAAAGLGEGGDKEDMMKGGEEEGDSYNSQ
SDAPTDSKHPKGEMEREGDEREGEGVPAPADSPSEDSSGVRNSREKRDAITLAIKDIKEA
IEEVKTRTVRSPYTPDEPKEPIWVMRQDLSPTAECCDLQPSLGGDSPGSDSQASPQGAES
SIRTPMLEGSESFESPPLSTKESRRSLASFPTYVEVPGPCDPEDLIDGIIFAANYLGSTQ
LLSDKTPSKNVRMMQAQEAVSRIKTAQKLAKNKKKAPEGEAQPMTEVDLFISTQRIKVLN
ADSQETMMDHPLRTISYIADIGNIVVLMARRRMPRPDSMDSVEASDPAEDEKQRQYKMIC
HVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQKEYSDLLNTQDMYNDDLIHFS
KSENCKDIYIEKQKGEILGVVIVESGWGSILPTVIIANMMHAGPSEKSGRLNIGDQIMSI
NGTSLVGLPLSTCQTIIKGLKNQSRIKLNIVRCPPVTTVLIRRPDLRYQLGFSVQNGIIC
SLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKTMPAAMYRLLT
AQEQPVYI
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccgaggaagtggagcatggccaggagctgattgagcacgtagaagccgacctg
ccccctcctcaatgccgtcaccacgacaaccacattgccaccaacaacggtcgaccccgg
cagcctagcaaccacagtagtgaaaacaacaaccaccctgctccccgctacaggagatat
aatgaggttcctggcgcaggtggcagcagggtcagaggggccccacaacgcaggtcaaca
gaggagccagaggcggaacttcacctgggggcccagtcccctccccaaccccagcagcag
cagcaggcccagggtcagtcacagcccatcttgcgtcctgcagtgacacgttaccgcaga
cagggggacagcgaggccaggctcagagcacagcagcagagacacatacagagacagcag
agagaggctgagagggtacaccaacaacaacaacaacctctgccagccccacagcctgtt
cactctctacccccagaacgagaagagccagaggaggatgaggaggagagagggaggtat
agagagagggagacagagggcgataactctgcgttaggccgttcggccagcacggagagt
gctttccacacacacacagaccgggcggagggcgactgcgtcatggccctagatcttgag
gcagaggacgagggcggtacttacgaggtgatgcttcgcccagaggcggagggatacaca
gagagcgctgagtcagagcagcaccatccccaccctcagcccaacctgaacctcaactac
ccccctcagccccctcccttaccccgggaacccctaccagacgttgggagaccccacagt
caggaggaggcagaggaaaccctgaaccctggtggtggttactctaactacgtttacacc
caacctctcaacctccatgggggaggggccagggtgccggggggacaggacagcagcgtc
gaggaagggatggagcctaaagacgaggcatattctgaagcctaccactactccctgaca
gaacatgtgtatgaggagatcagcgacgccccctctgctgctgctgctgagggggcgact
cctacaaatgccaacgagaacctccagcagagaaaggcggcgttccgtctgtttgagggg
ggggacgggggcggggactactggcagcaggaggcagtggggtcgaggctgcaccactac
gacgagcgctcggacggcgagtcagacagccctgagaaggaggcggagtttgctccgtac
ccgcgggcagacagctgtgaccaggacggtgaagaggacatcaacatgatcgtaacggaa
gtcagagagagttccagctctcagagtctggaaagagctgctgctgggttgggggaggga
ggagacaaagaagacatgatgaaaggaggagaggaagagggagactcttacaactcccaa
tccgacgcccccacagactccaaacatcccaagggagagatggaaagagagggggatgag
agagaaggagagggcgttccagccccagcagacagtccctctgaggactcgtctggggtt
cgtaacagtcgtgagaaaagagacgccatcaccctggccataaaggacatcaaagaggcc
atagaggaggtgaagaccaggacggtgaggtcaccctacacccctgatgagcctaaagaa
cccatctgggtgatgagacaggacctgagtcccaccgctgagtgttgtgacctgcaaccc
tcactagggggcgactctccaggttcagactctcaggcctctcctcagggggcggagtct
tcaatccggacacccatgcttgaagggagtgaaagcttcgagtctccaccgctttccact
aaagagtccaggagaagcctggcctcctttcctacctatgtagaagtcccaggtccatgt
gacccagaggacctgatcgatgggatcatctttgccgctaactacctgggctccacccag
ttgctgtctgacaagaccccctccaagaacgtgcgcatgatgcaggcccaggaggctgtc
agccgcatcaagacggcccagaaattagccaaaaacaagaagaaggctccagaaggtgag
gcccagcccatgacggaggtggacctcttcatctccacccagaggattaaagtcctcaac
gctgactcacaggagactatgatggaccaccctctgaggaccatctcctacatcgctgac
atcggcaacattgtggttctgatggcaaggcgccgtatgccccgcccagactccatggac
agcgtggaggcgtcagaccccgccgaggacgagaaacaacggcagtacaagatgatctgc
cacgtctttgagtccgaggatgcccagctgattgcccagtctataggccaggccttcagt
gtggcgtaccaggagttcctgcgggctaacggcatcaacccagaggacctgagtcagaag
gagtacagtgacctgctcaacactcaggacatgtacaacgatgacctcatacacttctcc
aagtctgagaactgcaaagacatttacatcgagaagcagaaaggtgagattctgggcgtg
gtcattgtggagagtgggtggggctccatcctgcccacagtcatcatcgccaacatgatg
catgctggtccgtcggagaagtcaggccgtcttaatatcggagaccagattatgtctatc
aacgggaccagtctggtggggctacccctgtccacctgccagaccataattaagggtctg
aagaaccagtctcgtatcaagctgaacattgtcaggtgtcctcctgttaccacggtgctc
atcagacgacctgacctcagataccagctgggcttcagcgtacagaacggcattatctgc
agccttatgcgagggggcatcgctgagaggggaggggtcagggtcggccaccgcatcatc
gagatcaatggccagagcgtggtggccacgccccacgagaagatcgtccacatcctgtcc
aatgctgtgggagagatccacatgaagacgatgccagctgccatgtaccgcctgctaact
gcccaggagcaacctgtttacatctag
DBGET
integrated database retrieval system
