Oncorhynchus nerka (sockeye salmon): 115111939
Help
Entry
115111939 CDS
T07952
Name
(RefSeq) GRIP and coiled-coil domain-containing protein 2-like
KO
K20282
GRIP and coiled-coil domain-containing protein 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115111939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115111939
Membrane trafficking [BR:
one04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
115111939
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rab_bind
GRIP
Motif
Other DBs
NCBI-GeneID:
115111939
NCBI-ProteinID:
XP_029494358
LinkDB
All DBs
Position
LG3:complement(50118816..50150806)
Genome browser
AA seq
1668 aa
AA seq
DB search
MEQDTSPESVTSPPPGAAAKSKLDTLSKDDLIKFAKKQMAAIQKMKSKCAVLEKEVDTLK
SQPKGNSGDSIIQELTERMSALLLEKAETQQSAVLLRKENEKVKHREQDAVGKLATLLGE
LDQAKEDHQKKIAALEKSLDSSQAKHKEEVEFFQTLLRKKEENDREKESEREKEKQRERE
HTNQSVEAVSCSLESQILSLQTELAAALERSAQVASALQEDHQRALTEAQQEVENLREEL
AQHSVQHEEELRALEEDFEMEKERLLLLQEELSEQLALKDSFLQDVQEDEEEPSGRSSGI
ARMLELSGLSLIDASDGETESGQLRSALEDQQSQNTMLQDELTFLGNVKTELEAELERVR
EEFHTEKEELQFKIEELLMTREVATPNHDLLSLETPNRDLQEAQAFTQLQQRGPQRDSVD
GLPASPASPSSPRQSLSCHVPGAAHQSLILQQGQAQELRSQCESLDRSQAVAEYEHTRDI
LRGLETELGQGTGDFTRQYEAMKEQAASAVQELQESVRRLTEERDGLVERVKGFDEDRDS
LLEKVQGQEKRLESFLKQTQAAEGLKEQLQTSMEEKTALALKLKDSVEAQTVLASELKAS
LEVQTVLAVELSASVEDLSKQNGEILSQLQMKESAVQELEETVNVVSTERDRTLSALQDR
EMEVMRLWEEREREVEESQGQREEVAELQARIEELEKERSLLKSNLEVVQRESSKNVQGS
PGEEVEELQARIEELEKERSLLKSNLEVVQRESSKNVQGSPGEEVEELQARIEELEKERS
LLKSNLEVVQRESSKNVQGSPGEEVEELQARIEELEKERSLLKSNLGEVVGDTEALQKDL
REMKLANEKMRTENQELLTQVSQATETLADREREEKEGREEEEEQAEKERRGLQQQLTEK
DTVISQLRSEMAGLLSSAPSPVSEENTANEFTEKIALLEKESKEKDERMNKIKAVAVKAR
KELDTSRKEAVSLKEEVEGLKAERERVTSSMKDIIHGAEGYKNLQLDYDRQTEQLDKERE
TVEGAEKQISELTKRLNNAVQQHEQLWSEREDLMTELETLRNTVRQIEGQTAELHRQTDT
LNRDLQAERLLKEQKTKELSSLQKEVEELTVQLRRQKQQSQQTTQELEQLRKEAQQSSLL
DMEMADYERLVKELNTKLSEKDVCVEELKTQIHTHTQKEDTLNQEIEVLKSQLDQGEDKS
SKMKQLLVKTKKDLADAKRQEAIQMMTLASLKGELEAHQQQLENNKIQCCDLTAERHRLQ
EQLRTLTEQQQRTSSSLQQRLTTLQQEANTAKAELSSVTAEFDSYKVRVHNVLKQQKNKT
SAQSDGDATKQEREQMESLVDQYKAKLQDSQQSLAVSTAELQQLQMEHDTLLERHNKILQ
ETVAKEAELRERFMSLQAEIMSLRTEHAQTVGQLTSQAVAQRSGFREQIRHLQDEHRTTV
ETLQNQMTRLENQLFTLQKQTSPAPVQTSRKSAVDRQPVDQGGTGGLGLGDLQSMAREEG
EGMETSETESLSSTYLPSLEQLLTSPDPKQEPFVWQVEPTKEELNQKLTTATRSMEHMNS
LLHETEATNAVLMEQVNLLKSEVRRLERNHEREKSVANLEYLKNVLLQFIFLQSGSERQA
LLPVIHTMLQLSPEEKNKLAAIAMGEEEVGGARGSGWTSYLHSWSGIR
NT seq
5007 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggacaccagcccagagtctgtgacctcacctcctccaggtgctgccgctaag
tcaaagttggacacgttgtccaaagatgacctcatcaagtttgccaagaagcagatggct
gccatacagaagatgaagtccaaatgtgcagttttggaaaaggaggttgatactctcaag
tctcagccaaaaggcaattcaggtgactccatcatacaggaactgaccgagaggatgagt
gccttgttgctggaaaaggctgagacccagcagagtgcggtgttgctgcggaaggagaat
gagaaggtcaagcaccgggaacaggatgcagtagggaaactggccaccctgctgggagag
ttggaccaggccaaggaagaccaccagaagaaaattgcagccttggagaagagcttagac
tcatcccaagccaaacacaaagaagaagttgaattcttccagacgcttctgaggaagaaa
gaagagaatgacagagagaaagagagcgaaagagagaaagaaaagcagagagaaagggaa
cacacaaaccagagtgtagaagccgttagctgcagcctggagtcacagatcctgagtctg
cagacagagctagctgcagccttggagcgaagcgcccaggtggcttcagcgctgcaagaa
gaccaccagagggcgctgacagaggcccagcaggaagtagagaacctgagagaggagttg
gctcagcatagtgtgcaacatgaagaggagctgagagctctggaagaggactttgagatg
gagaaagagagactgctactcctccaagaggagctcagtgagcagctggctctcaaagac
agcttcctgcaggatgtgcaggaagatgaggaggagcctagcggccgcagctcaggaatt
gccaggatgttggagctgtctggtttaagtctgattgatgccagtgatggagagacagag
agcggacagctacgatctgccctggaggaccagcaatcccagaataccatgctgcaagac
gagctgaccttcctggggaatgtgaagactgaactggaggcggagcttgagagggtgagg
gaggagtttcatacagagaaggaggaactacagtttaaaatcgaagagttgctgatgacc
cgggaggttgcgacccctaaccatgatcttctgagcctggaaacccctaaccgtgacctt
caggaggctcaagctttcactcagctccagcagagaggcccacagagagattcagtggac
ggcctacctgccagtcctgctagcccctccagccccagacagagcctgtcctgccatgtc
cctggtgcagcccaccagagcctgatcctacagcagggtcaggctcaggaactgaggtcc
cagtgtgagtccctagacaggagccaggcggtggctgagtacgaacacaccagagacatc
ctgagaggcctggagactgagctaggtcaggggaccggggacttcaccagacagtatgaa
gctatgaaggaacaggcggcttctgcagtccaggagctacaggagagcgtcagaaggctt
actgaggagcgagatggtctggtggagagggtgaaagggttcgatgaagacagagacagc
ctgttggaaaaggtccagggccaggagaagaggctggagagcttcctaaagcagacacag
gcagccgaggggctgaaggagcagctgcagacgtctatggaggagaagactgcgttagcc
ctcaagctaaaggactcagtagaggcgcagacagtgttagcctctgagctaaaggcatct
cttgaggtgcagacagtgttagctgtagagctaagtgcttcagtggaggatctgagcaag
cagaacggggagatcctctctcagctacagatgaaggagagtgctgttcaggagttagag
gaaacagtcaatgtggtgagcacagagagagacagaacactgtcagcactgcaggacaga
gagatggaggtgatgaggctgtgggaggaaagagagagggaggtggaggagagtcaaggc
cagagagaggaggtggctgagctacaggctcgtatagaggagttagagaaggagaggagc
ctgctgaagagtaatctagaggtggtgcagagggagagttctaagaatgtgcaggggagc
ccaggggaggaggtggaggagctgcaggctcgtatagaggagttagagaaggagaggagc
ctgctgaagagtaatctagaggtggtgcagagggagagttctaagaatgtgcaggggagc
ccaggggaggaggtggaggagctgcaggctcgtatagaggagctggagaaggagaggagc
ctgctgaagagtaatctagaggtggtgcagagggagagttctaagaatgtgcaggggagc
ccaggggaggaggtggaggagctgcaggctcgtatagaggagctggagaaggagaggagc
ctgctgaagagtaatctgggggaggtggtgggagatactgaagctctacagaaagaccta
agggagatgaaactggccaatgagaagatgagaacagagaaccaagaactactgacacag
gtcagccaggctacagagacactggcagacagagagagggaggaaaaggagggaagagag
gaggaggaagaacaggcggagaaggagaggagagggctacaacagcagctaacagagaag
gacacagtgatatctcagctgagaagtgagatggctggcttactgtcttcagccccgtct
cctgtctcagaggagaacacagccaatgagttcactgagaaaatcgccctgctggagaag
gaaagcaaagagaaggatgagaggatgaataagatcaaggcggtggctgtgaaagccagg
aaggagctggacaccagcaggaaagaggctgtgtcgctgaaggaggaagtggaggggttg
aaggctgagagagagcgagtgaccagctcaatgaaagacatcatccatggagcagaggga
tacaagaacttgcagctggactacgacaggcagacagagcagctggataaggagagagag
acggtggagggagctgagaaacagatctccgagctgaccaaacgactaaacaacgcagta
caacagcatgaacagttgtggtcggagagagaggacctgatgaccgaattggagactctg
aggaatacggtgagacagattgaaggacagacagcagaactacacagacagacagacacc
ctgaacagagacctgcaggctgagcgactactgaaggaacagaagacaaaggagctgtcg
tcgttgcagaaggaggtggaggagttgacagttcagctccgcagacagaagcagcagtct
cagcagacaacacaggagctggagcagctacgcaaggaggcccaacagagctcgttgttg
gacatggagatggcagactatgaacgcctggtcaaagaactcaacaccaaactgtcagag
aaggacgtgtgtgtggaggagctgaaaacacagatacacacacacacacagaaagaagac
acactcaaccaggagatcgaggttctgaagtcccagctggaccaaggggaggataagagc
tccaagatgaaacagctgctggtgaaaaccaagaaagacctggctgatgccaagagacag
gaagccattcagatgatgacgctggcctctctgaagggagagctggaggcacatcaacag
caactagagaacaacaagatccagtgctgtgacctgactgcggagcgccacagactgcag
gagcagctgaggactctgactgaacaacagcagagaacaagcagctccctacaacagaga
ctgaccacactacaacaggaggctaacactgccaaggctgagctgtcatctgtcactgct
gagtttgacagctataaggtcagagttcacaacgtcctcaaacaacagaagaacaaaacc
tcagcacagagcgatggagacgccactaaacaggagagagagcagatggagtccttggtg
gaccagtataaagccaagctgcaggacagtcagcagagtctggcggtgagcactgcagaa
ctacaacagctccagatggaacatgacacactgctggaacgacacaacaagatactgcag
gagactgttgctaaagaggccgagctcagagagagattcatgtctctccaggctgagatt
atgtcactgcgaacagagcatgctcagacggtgggtcagctgacctcgcaggccgtggcc
cagcgctcagggttcagggagcagatccgccaccttcaggatgaacacagaactacagta
gagaccctgcagaaccagatgacccggctggagaaccaactgtttacactgcagaaacag
accagtccagctccagtccagaccagtcgtaagtcagcggtggaccgccagcccgtggac
caggggggaacgggggggctgggcctcggtgatctccagtccatggctagagaggagggg
gagggcatggagacctccgagacagagtccctgtcatccacatacctaccctcactggag
caactactcacctccccagaccccaaacaggagccgtttgtgtggcaggtggagccgact
aaagaggagttgaatcagaagttgaccacagctacacgcagtatggaacacatgaacagt
ctactgcatgagaccgaagctactaacgctgttctgatggaacaggtcaatctgttgaag
tctgaagtgcgtcgtctggagcgtaaccatgagcgagagaagagtgtagccaacctggag
tatctgaagaatgtccttttacagttcatcttcctgcagtcaggcagcgagagacaggct
ctactccctgtcatacacaccatgttacaactcagccctgaggagaagaataaactggct
gctatcgcaatgggtgaggaggaggtgggaggagctagaggctcaggatggacctcctac
ctacacagttggtcaggcatcagatga
DBGET
integrated database retrieval system
