KEGG   Oncorhynchus nerka (sockeye salmon): 115111952
Entry
115111952         CDS       T07952                                 
Symbol
atg12
Name
(RefSeq) ubiquitin-like protein ATG12
  KO
K08336  ubiquitin-like protein ATG12
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04068  FoxO signaling pathway
one04136  Autophagy - other
one04140  Autophagy - animal
one04621  NOD-like receptor signaling pathway
one04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    115111952 (atg12)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    115111952 (atg12)
   04136 Autophagy - other
    115111952 (atg12)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    115111952 (atg12)
   04622 RIG-I-like receptor signaling pathway
    115111952 (atg12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:one04131]
    115111952 (atg12)
   04121 Ubiquitin system [BR:one04121]
    115111952 (atg12)
   03029 Mitochondrial biogenesis [BR:one03029]
    115111952 (atg12)
Membrane trafficking [BR:one04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    115111952 (atg12)
Ubiquitin system [BR:one04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   115111952 (atg12)
Mitochondrial biogenesis [BR:one03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    115111952 (atg12)
SSDB
Motif
Pfam: APG12 ATG8
Other DBs
NCBI-GeneID: 115111952
NCBI-ProteinID: XP_029494378
LinkDB
Position
LG27:35953090..35957762
AA seq 120 aa
MSDNAESPTETQKDEPSTPQQSTEGSGMADDKKKIDVLLKAVGDTPIMKTKKWSVEKGRT
VQSLSQFISRFLKMEANEQLFIYVNQSFSPSPDQEVGVLFECFGSDGKLVLHYCKSQAWG
NT seq 363 nt   +upstreamnt  +downstreamnt
atgtctgacaacgcagagtctcctacagaaacgcaaaaagatgagccttcaaccccacaa
cagtctacggaaggctcggggatggcagacgataagaaaaaaattgatgtgttgttgaag
gcagtaggagacacccccatcatgaagacaaagaaatggtctgtagagaaagggaggaca
gtgcaatcactctctcaattcatctctcgattcctcaagatggaggccaatgaacagctg
ttcatttacgtcaaccagtcattctctccctcgcctgatcaggaagtaggagtcctgttt
gaatgttttggcagcgatgggaagcttgttctacattactgtaaatctcaagcctggggt
taa

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