Oncorhynchus nerka (sockeye salmon): 115111972
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Entry
115111972 CDS
T07952
Name
(RefSeq) far upstream element-binding protein 3-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115111972
03041 Spliceosome [BR:
one03041
]
115111972
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
115111972
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115111972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
FUBP_C
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
115111972
NCBI-ProteinID:
XP_029494416
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Position
LG27:37013187..37112635
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AA seq
562 aa
AA seq
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MMMAELVQGQASVAQSGMKADGFAHALHRARQMAGKMRNEQISHLNSSPPIVDPSTYGCV
DQKRSVEVGNQLGAMVHQRAVLTEDFKVPDRMVGFIIGRGGEQITRIQLESGCKIQIASE
SGGMMDRACSLNGTPESIEQAKRMLGQIVDRCRNSPGFHSEAEDNSSVHEMLIPASKVGL
VIGRGGDTIKQLQERIGVKMMMIQDGPMPTGVDKPLRITGDPYKVHQARELVIEIIRDKY
QGDLHSGRNDFASRLGGSTLDVAVPRFAVGIVIGRSGEMIKKIQGDSGVRIQFKPDDGIS
PERIAQVMGQPDRCQHAVQLINELTQTAQQERDGFGSSGGPRGRGRGRGDWVMGSPGGLQ
EVTYTILADKCGLVIGKGGDTIKSINQQSGAHVELQRNPPPNTDPNVRVFSIRGTPQQME
VACQLIDDKIGGSGIVSNGSFGLSPYTQSPATHQNCGSGAQTLMTGGWGTAYQTWQPQGQ
QDHSHNGSQAGQMDYSTAWEQYYKKLGQTSQQQSSLPEYSAAMAEYYRQQGAYLWPGAQA
TNPGPRSSDIEGQMMIACGQQM
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggcggagttggtgcagggacaggcctccgttgctcagtccggaatgaaagct
gacggcttcgcccacgctttacatcgggcccgacagatggcaggaaaaatgaggaatgag
cagatttctcacttaaacagttccccacctattgtagacccctccacgtatggctgcgtg
gaccagaagcgatcggtggaagtaggtaaccagctgggagccatggtacatcaaagggct
gttttgacagaagacttcaaagtgcctgatagaatggttggattcatcataggcagagga
ggtgaacaaattacgagaatccagctggagtccgggtgcaagattcaaattgcctctgag
agtggcggtatgatggacagagcctgctccctcaatggaaccccagagagcattgagcag
gccaaaagaatgcttgggcagatagtggaccgctgtcgaaacagccctgggttccacagc
gaggctgaggacaacagctcagtccacgagatgctcatcccagccagcaaagtgggccta
gtcatcgggaggggaggggacaccatcaagcaactgcaggagagaataggagtgaagatg
atgatgatccaggatggccccatgcccaccggggtggacaaacccctgagaatcactggg
gatccctacaaggtccatcaagcgcgggaattggtgatagagatcatccgcgacaaatac
cagggagacttgcacagtggccgaaacgactttgcgtcaagattgggtggaagtactttg
gatgtggctgtacccaggtttgcagtggggattgtcatcggcaggagtggtgagatgatc
aagaagatccagggagattccggagtgaggatccaattcaaaccagatgatggcatcagc
ccagagcgcatcgcccaagtgatgggacaaccagacaggtgtcagcacgctgtccaactc
atcaacgagctcacccaaacagcacagcaggaacgtgatggctttggaagctctggagga
ccaagaggaaggggacgaggccgcggggactgggtcatgggctcaccagggggactgcag
gaggtcacctacacgatacttgcagacaagtgtggtctggtgatcggcaaaggcggagat
accatcaagagcatcaaccagcagtctggagcccacgtggagctgcagaggaacccccct
cccaacaccgaccccaatgttcgcgtcttctccatcagaggcaccccgcaacagatggag
gtagcatgccagctcattgacgacaagatcggaggctcaggaatagtgagcaatggtagt
tttgggttgagcccttacactcaaagccctgcaactcatcaaaattgtggcagtggagcc
cagactttaatgacagggggatgggggacggcttatcaaacatggcagcctcaaggccag
caagaccacagtcacaatggatcccaggcaggccagatggactactctacagcttgggag
cagtattataaaaagctaggtcagacatctcagcagcagagctcactcccagaatacagt
gcagctatggcagaatattacaggcagcagggagcgtacctctggccgggtgcacaggca
accaacccagggcccaggtcttcagatatagaaggacaaatgatgattgcatgtggacag
caaatgtaa
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