Oncorhynchus nerka (sockeye salmon): 115111981
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Entry
115111981 CDS
T07952
Symbol
barhl1
Name
(RefSeq) barH-like 1 homeobox protein
KO
K09360
BarH-like
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115111981 (barhl1)
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
115111981 (barhl1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7645
UBX7_N
Motif
Other DBs
NCBI-GeneID:
115111981
NCBI-ProteinID:
XP_029494441
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Position
LG27:37437844..37441494
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AA seq
310 aa
AA seq
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MEVSTNGSSFGVDSLSHRPASPHFLKGDSSIEKCRSPLELRQRSVLESGCSSPLSPRLES
VEDAMHRHDFALESSLQHGQLPQPRTVASSFLIRDILADCNKPLAACAPYKSHEHPMPDS
EHFESKIADDFMDKIHSNSSSENEYQARDRDMDSSRDSPSSRLKKPRKARTAFSDHQLAQ
LERSFERQKYLSVQDRMELAASLNLSDTQVKTWYQNRRTKWKRQTAVGLELLAEAGNYST
LQRMFPSPYFYSQSLVSNLDTTAGLYLYRGPSAPPPIQRPLFPRILLHGLQGGGEPLSSL
SGVLPRPTHR
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggaggtctccacaaacgggtcgagttttggtgttgactctctgtctcacagaccagca
agcccacactttttgaaaggagacagttcgatcgaaaaatgccggtctccactggagtta
agacagaggtccgtcctggaaagcggctgctcatctcccctctccccgcgactggagtct
gtcgaagatgcaatgcacagacatgattttgcactggagtcctcgctacagcatgggcaa
ctgccccagccacggacagtcgcatcatcttttcttattcgggatattcttgcagactgt
aacaaaccacttgcagcatgtgccccatacaagagtcatgaacatcccatgccagactcc
gagcattttgagtccaaaatagcggacgactttatggataaaatccacagcaactcgtcc
tcggaaaatgaataccaagcgcgagaccgtgacatggacagcagcagagacagtccgtcg
tctcggctgaagaagccccggaaagctcgaaccgctttcagtgatcaccagctggcccag
ctcgagcgcagcttcgaaaggcagaaatatctgagtgtgcaggacagaatggagttggca
gcttcgctcaacctcagcgacactcaggtcaaaacttggtaccagaacagacgaacgaaa
tggaagcgccagaccgcggttggacttgaattgttggccgaagctggcaactactcgact
cttcaaagaatgtttccctcgccatatttttactcacaaagtctggtttcgaacctagat
accacagcgggcttatatctgtacagaggaccctcggcaccaccacctatccagcgtccg
ctgtttccacgaatcctcctccatggtcttcagggaggtggggagccgctctcctctcta
tctggggtcctccctcgacctacacatcgatga
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