Oncorhynchus nerka (sockeye salmon): 115112019
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Entry
115112019 CDS
T07952
Symbol
snx2
Name
(RefSeq) sorting nexin-2
KO
K17917
sorting nexin-1/2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115112019 (snx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115112019 (snx2)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115112019 (snx2)
Membrane trafficking [BR:
one04131
]
Endocytosis
Macropinocytosis
Sorting nexins
115112019 (snx2)
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
115112019 (snx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
BAR_3_WASP_bdg
HR1
DHC
Cytochrom_NNT
DDE_Tnp_1_3
FAM92
Motif
Other DBs
NCBI-GeneID:
115112019
NCBI-ProteinID:
XP_029494518
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All DBs
Position
LG27:complement(38979740..39011011)
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AA seq
515 aa
AA seq
DB search
MAAEMEPPPLGDAGQTDFREIEDGEGFFVSTVTTLESPEPSSPDPPSMPAEGISTNGPKQ
EDISLDDDPEDLFAEATEEVSLDSPEREPILSDGPSPAITPVTPTAMLTPRMGLGTAEMF
ERSLDEIEEDDSGDTFDMHIAVSDPEKVGDGMNAYMGYKVTTKTSMTIFSKNETTVRRRF
SDFLGLHSKLASRYLHIGYIVPPAPEKSIVGMTKVKVGKEDLSSAEFVEKRRSALERYLM
RTVKHPILLKDPDVMMFLESSELPRAVSTQALSGAGILRMVNKAADAVNKMTIKMNESDA
WFEEKHQQFENLDLQLRKLHASVECLVCHRKELSVNTASFAKSAAMLGNSEDHTALSRAL
SQLAEVEEKIDQLHQDQAYADFYLFSELLGDYVRLITAVKGVFDHRMKTWSKWQDTQLLL
QKKREAESKLQFANKPDKLQQAQDEIKELEGKVQQGEKDFELISKTIRKEVSRFEKERVK
DFKVVIIKYLESLVQTQQQLIKYWEAFLPEAKAIA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggagatggaaccgccaccactgggagatgcaggacagactgacttcagggaa
atagaagatggagaaggcttttttgtcagtactgtcactacactagagtctccagaaccc
tcatctccagatccacccagcatgcctgcagaaggcatcagcacaaatggacctaagcaa
gaagacatttcattggatgatgacccagaggatctgtttgcagaagcaacagaggaggtt
tctctggatagtccagagagggagcccatcctgtcagacggtccatctccggccatcacc
ccagtcacccccacagctatgctcacccccaggatgggcctgggcactgccgagatgttt
gagagatccctggatgagattgaagaggacgatagtggtgacacctttgacatgcatata
gcagtgtccgatccagaaaaagttggggatggaatgaatgcttacatgggatacaaagta
actacaaagacctctatgaccattttcagcaagaatgaaaccactgtaaggaggaggttt
agtgactttctaggcttgcacagcaaactagcctccaggtacctgcatataggatacata
gtccctcccgctccagagaaaagcattgtgggaatgactaaggtcaaagttgggaaagag
gatttgtcttctgcagaatttgtcgagaagagaagatcagccttagaaaggtatctgatg
agaacagtgaaacatcccatcctgctgaaggatccggatgtcatgatgttcctggagagt
tcagagctgccgagagcggttagcacccaggcgctgagtggggccggaatattgaggatg
gtaaacaaagctgccgacgctgtcaacaaaatgacaatcaagatgaatgaatcggatgcg
tggtttgaggagaagcaccagcagtttgagaacctcgacttgcaactcagaaaactgcat
gctagtgtggagtgtctggtctgccaccggaaagagctgtcggtaaacacggcatccttc
gccaagtcggcagccatgcttgggaactccgaggaccacacagctctgtcgcgggccctg
tcgcagttggccgaggtggaggagaagatcgaccagctgcaccaggaccaggcttacgct
gatttctacctgttctccgagctgctgggggactatgtacgtctcatcactgcagtcaag
ggtgtatttgaccaccggatgaagacttggtccaagtggcaggacacccagctcttgctg
cagaagaagcgtgaggctgagtccaaactccagttcgcaaacaagccagacaagctacag
caggctcaggacgaaatcaaagagttggaggggaaggtccagcaaggtgaaaaagacttt
gagctgatttccaaaaccattcgaaaagaagtgagccgattcgagaaagaaagagtgaag
gacttcaaagttgtcattattaaatacctggagtcgcttgtgcaaacacaacagcagctg
ataaagtattgggaggcgttcttacccgaagccaaagctatcgcataa
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