Oncorhynchus nerka (sockeye salmon): 115112038
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Entry
115112038 CDS
T07952
Name
(RefSeq) USP6 N-terminal-like protein isoform X1
KO
K20133
USP6 N-terminal-like protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115112038
Membrane trafficking [BR:
one04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
115112038
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
115112038
NCBI-ProteinID:
XP_029494556
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All DBs
Position
LG27:complement(42381645..42419962)
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AA seq
623 aa
AA seq
DB search
MIRRKSSHLFERVVKKHDRRSKRDKKEKPSGRQEGVEIDPWEDADYSIYRVTDRFGFLHD
EDLPAPSAHEEKKKNLEIERVEKWLKMVKKWDKYWNSDRMVKRVYKGLPLQLRGQAWALM
LDVEKLKNENEGKYERMKEQARMFSQEIKQIDLDVNRTFRNHIMFMDRFGFKQQSLFHVL
SAYSVYNTEVSYCQGMSQVAALLLMYMNEEDAFWALSQLLTNQKHAMHGFFIPGFPKLQR
FQAHHDQILSKLIPKLKKHLDREQMSCGIYSTKWFLQCFIDRTPFTLTLRLWDIYILEGE
KLLTAMSYTILRIFKKRLLKMNLEDLREFLQEKIALSFLNSDDIIIDQLQASMAELRKMK
LDLPPPAKPDELPQKALGLELPVLLTPLKPPRGVSPDQGSKRPGAGGLGLHIITYQPDII
SQDDSPSKEDRKDKEALNMEEEDEEEVSLPSPDPVLIHTIQAQVTPDGPPQAGAGPPPYE
PPGGNEPNVMGLPAILMVLHKEKSVESSSGPVALPETQVVVQQGTNTPPQSPMEESTLTP
PVAPSSLSPPQPPCRVPRTQSAPLAQASQRPTGLAQSESRSVGERAEDVYLARLLEQAMA
LPKHRAQTGEKGEPGDPEWPVRF
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgatacggaggaagagttcacacttgtttgagcgtgtcgttaaaaagcacgaccgtcgc
tctaagagggataagaaagagaaaccgagtggcagacaggagggggtggagattgacccc
tgggaggatgcagattacagtatttacagagtcactgaccgtttcgggtttctgcatgac
gaggatctgccagcccctagtgcacatgaggagaagaaaaagaacctggaaattgaacgg
gtagaaaaatggctgaagatggtgaaaaaatgggataaatactggaacagtgacaggatg
gtaaagcgtgtgtataagggtctccccctgcagctgagaggccaggcctgggccctgatg
ctggatgtggagaagttgaagaatgagaacgaggggaagtatgagaggatgaaggaacag
gccagaatgttctcccaggaaatcaaacagatcgatctggacgtgaacaggacgtttaga
aaccacatcatgttcatggatcgattcggattcaaacagcagtctttatttcatgtcctg
tctgcctattcagtctacaacacggaggtgagctactgccagggcatgagccaggtcgcc
gccttgctgctgatgtacatgaacgaggaagacgccttctgggccctgtcacagctactg
accaatcagaagcatgccatgcacggtttcttcattcctgggtttcccaaactgcagcgc
ttccaggcgcaccacgatcagattctctccaaactcatccccaagctgaagaaacatctg
gacagggaacagatgtcctgtgggatctacagcactaaatggttcctgcagtgtttcatt
gacaggaccccgttcaccctgactctacgcttgtgggacatctacattctggaaggagag
aaacttcttactgccatgtcctacacaatccttagaatatttaagaaacgtctcctgaag
atgaatctggaggacctgagagagtttcttcaggagaagatcgccctgtctttcctcaac
agcgatgatatcatcatcgatcagctgcaggcctccatggcggaactacgcaagatgaag
ctggaccttccacccccagccaagccagatgagctgccacagaaggccctgggtttggag
ctacctgttctgctcacccctctcaagccccccaggggagtctcccctgaccagggatcc
aaacgaccaggagcagggggtctgggtctccacatcatcacctaccagccagacatcatc
tcccaagacgacagcccttccaaggaggacaggaaggacaaggaagctctcaacatggag
gaagaggatgaggaggaagtatctcttccatctccagaccccgttctcatccacaccatc
caggctcaagttacccccgatgggcctccccaggctggggctgggccaccaccttatgag
ccaccagggggtaatgagcccaatgttatgggactacctgccattcttatggtactccac
aaagaaaaaagtgttgagagctcctctggtccagtggctttaccagagacacaggtcgta
gttcaacagggtacaaacacacctccacaaagccccatggaggagtcgaccctgactccc
ccagttgccccttcatcccttagccctccccagccaccctgcagggtcccccggactcag
tcagcacccttagcccaggcttcccagcggcctacgggcctggcccagagtgagagccgt
tcagtaggggagagggcggaggatgtgtacctggccaggcttctggagcaggccatggct
ctgcctaaacacagggcccagacaggagaaaaaggagagccaggagacccagaatggcca
gttcgattctag
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