Oncorhynchus nerka (sockeye salmon): 115112047
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Entry
115112047 CDS
T07952
Name
(RefSeq) transcription factor E2F8-like isoform X1
KO
K09391
transcription factor E2F7/8
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115112047
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
115112047
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Gene cluster
GFIT
Motif
Pfam:
E2F_TDP
TrmB
Motif
Other DBs
NCBI-GeneID:
115112047
NCBI-ProteinID:
XP_029494575
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Position
LG27:43680867..43693079
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AA seq
927 aa
AA seq
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MSSTSPESQYLRHTTQTTTSNHKGNVFAEPQALTKTPRKASTQGTVLTEIQSNMGPLMTP
TKGRETGTGEPWTPTSNLKMLMSAASPEIRNREKELCMDSEGGDAMDHELGEEGEKQISR
KEKSLGLLCHKFLARYPDYPNPALNNNISLDDVATELNVERRRIYDIMNVLESLHMVSRL
AKNRYTWHGRANLPQTLAKLRQVGEEHRYGQQMQQIRQRSLEKELDSDGEEKENEEVEGG
EQGQKEMFFVELPGVEFKAASVNSRKDKSLRVMSQKFVMLFLVSTPRVVSLDVAARILIG
EDQVADQDKSKFKTKVRRLYDIANVLRSLKLIEKVHVTEEKGRKPAFEWTGPEDFPSVKE
TTATTATAKRKLESRTSVDNCAKNLFSSPGSKRSFTRHPSLIKLAKSIQEDRRKINSAPT
SPVKNDSSSSEFFPTKMAQLAAICKFQLDQQSNKVVDRTPKSAVTVTEALLAHQQKAAKK
PGAPQPPVLTPTEARASTVHLTPRAQFTPQPTGAMSFHPAQCSPLIPMLLPQHQGGGPYA
IYMHPSSLRPHPLTRPQPTSLAVRSMTFEDKTGRSPSDVTVQGHSSATNKLPTSSPSALK
RVCSERTSEESPSKAKRIDPSTRDTSPKLCEILQARLKARRGGLVSSRPSPRALHLDPEF
VNTPGSSVAVAANQTLEQNLETFLEKEEKVATSDSEAGLTPVRAVPLNPQHLHTETLIPT
GYLIPISQQSLFSYKDHNTESSKAFTPTYNIYHTPTAGSRPPPIQEFTPTSLPLHRPPPS
SPFSAQGHRFPSPAILNFTLQNLGLIPGPGSVPTYSPGTGHTPEHPSSMPSPLPPHLGLH
QRSGMVFVKPMSPVPVQHQMTGPGGQPLTLIGLQQITTPKGTALPQHSFFHTPLATVVTT
SHGHTAPAGTKTVYIPQRKLDVTAEDT
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcacttcaccggagtcccagtatctgagacatacaactcaaaccaccacctct
aatcacaaggggaatgtctttgcagagccacaagcactgacgaaaacaccaaggaaagca
tctacccaaggcactgtgctaacagagattcaatccaacatgggaccccttatgacccca
actaaaggaagggagactgggactggtgagccttggaccccaacctccaatttgaaaatg
ctgatgagcgctgccagccctgagatcaggaacagagagaaagagctgtgtatggactct
gagggaggggatgccatggaccacgagcttggagaggaaggggagaaacagatcagcaga
aaagagaagagtctgggtttgctctgtcacaagttcctggcccgctaccctgactatccc
aaccctgccctcaacaacaacatcagtctggatgatgttgccacagagcttaatgtggag
cgcaggcgcatctatgacatcatgaatgtgctggagagcttgcacatggtcagccggcta
gccaagaatcgctacacgtggcacgggcgcgctaacctaccacagaccctggccaagttg
cggcaggtgggcgaggagcatcgctacgggcaacagatgcagcagatccgccagcgcagc
ctggaaaaggagttggactcggacggtgaggagaaagagaacgaggaggtggagggagga
gaacagggccagaaggagatgttctttgttgagcttcctggggtggagtttaaagcagcc
tcagtgaacagcaggaaggacaagtctctgagggtgatgagccagaagtttgtcatgttg
ttcctggtgtccacacctcgggtggtcagtttggatgtggctgccaggatcctcattgga
gaggaccaggtggctgatcaggacaagagcaagttcaagactaaggtccgcaggctgtat
gatatagccaacgtgctgcggagcctgaagctgatagagaaggtccatgtgacagaggag
aaagggaggaagccagcctttgaatggactggccctgaggacttccccagtgtgaaggag
accactgccactacagcgactgccaagagaaaactggagtctcgtacctccgtagacaac
tgtgccaaaaatctcttctcctctccggggagtaaacgcagcttcacccgccacccctcc
ctcatcaaactggccaagagcatccaggaagaccggcgcaagatcaactcagcccccacc
agccctgtcaagaatgattcctcgagcagtgagttctttcccaccaaaatggcccaacta
gcggccatctgtaagttccagcttgaccagcaatcaaacaaggttgttgacaggacaccg
aagtctgccgttactgtgactgaggcactgctagctcatcaacagaaagctgctaaaaag
ccaggagctccacagcccccagtattaacacccacagaagcccgtgccagcactgtccac
ctcaccccacgggcacagttcaccccccaacctactggggcaatgtccttccaccctgcc
cagtgttcacccctcatccctatgctgctgccccaacaccagggaggcggtccctatgcc
atctacatgcacccctcctccttaaggccacaccccctaaccaggcctcagccaaccagc
ctcgctgtgcgctctatgaccttcgaggataagacggggcggagcccgagtgatgtcaca
gtgcaaggccactcgtctgctacgaacaagctgccaaccagcagcccctcggcattaaaa
cgtgtgtgttcagagagaacttcagaggaaagcccctccaaggccaagaggattgaccct
agcacaagggacacgtctcctaagctgtgtgagatcctccaggctcgtctaaaggcgcgt
cgcgggggtctcgtctccagccgtccctcaccccgagccctccacctggacccagagttc
gtcaacacccctgggagctcagtggccgtcgcagccaatcagacactggagcagaacctg
gagaccttcctggagaaggaggagaaggtcgcaacctcagacagcgaggcagggctcacg
ccggtcagagctgttccactgaaccctcaacacctacacacagagactctgatccccact
ggctacctgatccccatctcccagcagtcactcttcagctacaaagaccacaacacagag
agcagcaaagccttcacacccacctacaacatctaccacacacccaccgcaggctctaga
cctcccccgatccaggagttcacccccaccagcctccccctccacaggcctcccccctcc
tcgcccttctctgcccagggacaccgcttccccagccctgccatcctcaactttaccctg
cagaacctgggccttatccctgggcctggctctgtgccaacttacagccctggcactggc
cacaccccggagcaccccagctccatgcccagccccctgcctccccacctgggcctgcat
cagaggagcggcatggtgttcgttaagcccatgtcccccgtgccagtccaacatcagatg
accggcccgggcgggcaaccactcacgctaatcggcctacagcagataaccacgcccaaa
gggacggccctcccccagcacagtttcttccacaccccgctggctaccgtggtaaccacc
agccatggacacacggcgccagcgggcaccaaaaccgtttacatccctcagcggaagctg
gacgtcaccgctgaggacacctaa
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