Oncorhynchus nerka (sockeye salmon): 115112107 Help Entry 115112107         CDS       T07952                                  Name (RefSeq) neural-cadherin-like isoform X1   KO K27892   neural-cadherin Organism one  Oncorhynchus nerka (sockeye salmon) Brite KEGG Orthology (KO) [BR:one00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:one04515]     115112107 Cell adhesion molecules [BR:one04515]  Cadherins   Cadherin related    115112107 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Laminin_G_2 Laminin_G_1 Ig_Shg Cadherin_CELSR2_9th CADH_Y-type_LIR Cadherin_pro EGF Fibulin_C Cadherin_2 hEGF EGF_Teneurin Big_9 Y_Y_Y Laminin_G_3 cEGF Motif Other DBs NCBI-GeneID:  115112107 NCBI-ProteinID:  XP_029494768 LinkDB All DBs Position LG27:46096061..46295186 Genome browser AA seq 2897 aa AA seqDB search MIWTILICYFVTSVLGNKTEERIPFFHGHVFENSEPGSKVNGLSIPVKRVDAQRWCSNSG MHLKLLGDGSEDFRVFAHHKRGHILLKTSIILDREERSEYLLSLGLCCQSCAVNDHVVAE VASVKVDVLDTNDHEPTFPNVDIKMSLDDATALRSVVYKVTAEDTDSGKNAELIYFALPK NGSFYVVPKTGDVLLVDSILGLTAPIKFNVFAMDHGWPSRTSQSIDIEINPRQWPAVPRP SHGEPNSRQPRKSRSLLESSEPIVLNVSEDASIGSVVMNLYPVRFQAASFELMDPGVDSS PVTVSRDSGDIVITRRLDRETEPLVEITVKVQDKRGPDWYLVRLELTVTDVNDNVPEWTM VPSPYLAVVSPNALAGSLVYKLHAQDGDEGNNGEVEYFLSDGGDGRFEVDRKSGHVRTTG LPLQRDKEYLLTVVAADRLGSRSPPVVVSVIAGARAPQFSNASFIISLPENTPEGQPFLA TLAVSFQKQPISYSLLINPSSLFSMQADTGEITLTRTIDFEMDQHSFLLMVRASEDQDSL SSAAEVRVIITDENDCVPEFLQSIYSKDSVPETVTTATSLLQVSASDCDSDLNAELSYYT LSPDFSISPHGTIFPAGQLDYERPNHLYEFVVMAVDKGDVPRTGTATVRIRMANVNDEVP EFSQHVYRTFVSEDAGPNTLVATVLAKDPDGDGITYRITTGNDEGNFVIDSQKGLIRLRS SPPPRLQGVEYVLNVTATDDNASGGPQALSSTAQVIVGVDDVNNNKPVFEKCQQYRERTT VLENQPAGAFVLQVHAVDADEGSNGRVTYGFMHKDSTVPAFSIHPDTGAIVTSRKFDRER QREYAVTVTATDQAADPLIGICQLNILILDENDNSPKFENLRYEYFLREDTMIGTSFLRV AAHDDDYSTNAAVTYSMSKEQPEYLRVNPLTGWVYVNQPISQRTYITREIVATDGGNRSS SVELSVTITNVKNQPPQWDRDSYDVVIPENTVRDTPIVTIKATSPLGDPRVTYNLEDGMV PETNMPVRFYLTPNREDGSASILVAEPLDYETTRNFILRVRAQNVAAVPLAAFTTVHLNI TDVNDNVPFFTSSIYEASVTEGAEVGTFVTQVSSNDLDLGLNGKISYSLLKDRSGDYQYF RIDPELGSIYTEAVFDRETKGSYLLEVKSVDGWESARPGKHGQPNSDTAYVRVFISDVND NKPVFAQTVYEVDVDEDADVGFAILTVSANDEDEGANAKLRYQITSGNTGGVFDVEPEVG TIFIAQPLDYERNKGYKLLVLASDGKWEDYADVMVNVVNKNDEAPVFTVNEYYGSVTEEL DGSPVFVLQVTATDPDKDADQEALRYSLHGQGAESEFIIDEVTGKIYAQRTLNREERAVW RFVVLATDEGGEGLTGFTDIIINVWDINDNAPVFTCAPDCHGNVPENSAPGTSVMEMTAT DLDDSAVGQNAVLSYRIVGDTGTGGSGSDMFSINPSTGTISVAMSGLDREQAEAYLLVVE ARDGGGMMGTGTATIRVTDVNDHAPRFTERSCLARVPESSEPNAVVLEMSAEDWDTGENA QLTFSVVAGDPEQKFSMVSHRQEQRGTLRLKKRLDYERTSEQRFNLTLKVEDLDFSSFIH CIIEVEDCNDHTPIFIALSQPPAPLAEDVPVGSSVARLTASDSDSGQNKEITYKILQESD ILGQFSVDQSGLVTVTSALDRETAAQHHLVILATDHGSPALTGSTVIQLTLLDVNDNGPE FEAVYTPVVWENVAGPQLVRLNQTSTLLRAVDRDSAENGSPFYFSLPLELNHSNDFYLQD NGNGTATITALRAFDRERQKEFHLQIIMSDSGHPPKTVTNTLTITIGDENDHAHQAGEKE IFVNSHRGRMPTTVLGKVYAPDPDDWDNKTYAFEGHVPNYFLLNKRTGFLIIKENTPPGS YEFQVRVSDGVWPDAVSGVTVYVRELRDEAIYNSGSLRLADITAKDFIEQRGSLRSRYEL LVDFLSEMLAVGVDDINVFSLTDVRERTLDVRFAVHSSPFLRAERLQGYLAAHKQKLQSF LQVNVSQVHVDECANTDCGGSGGCSNVLSVSDTPTVVDSGSMSLVSVTVESTAVCSCSGR EHVHKICSSYPRNPCFNGGICVDTPSGYRCQCPTQFEGPECQQTKHSFHGNGYAWFPPIR PCFESHLSLEFITEVADGLLLYSGPLAQLQPWDLEDFMAIELIDGTPTLKINHGSGTLVL QLPGNVNVADRRWHRLDVRSNSKEVRFTLDRCAGATVMEMEGVGSWLTTEDHSSCEVTGV TPNLDRHLNGTQVLQLGGVNEDLPYVYPQLQHKHFTGCIRNLVVDSKFYDLGNPADSVGS SPGCLTTDGSCVNVGIPSCGPRGRCHGEWGSFSCQCIPGYTGTQCEQEVPEYSFDGRSHV HYQLASPLPARRTQAQVLVRTRKHGSAILSLLSKEQTEYLRLEIYQGLLAVFYNLGDGDY NLTLPSYRLDNGEWHEVYLDRHDNELTLRLDGGGGRREASAAPGRSREIITDPTVVMLGN AFSSGSNKSFQGCMRDLRLNGRYVPLDGQSRDGISVVSSQGLSVGCSSDSCKRNQCSPPF TCVDLWRVHECRCPPGHMVKVNGTVKFCVYTLCASRPCHRGTCVAQSPSKFTCHCPEGYR GRHCEVALAIYRDDVGLSFSSLFAICICFMALLVLLLGIFLYTRWRSYKGLKEGVYHVSA HHDGWEDIRENVLNYDEEGGGEEDQNAYDMAELQKSLQPSPAQSVQYSRSRAIHQHHHTQ HQHPQPQDTLSRLGANTALSSFTTTLRRDVPPTRTPAQGQSRPLLLARKSLSFSSQDLAR YLCEIIRDADQAPETAPFDSLQVFSTEGGGSLAGSLSSFSSAGLEEDTAKGQDSLKDWGP RFEKLKALYEKTEASDL NT seq 8694 nt NT seq  +upstreamnt  +downstreamnt atgatttggactattttgatatgctatttcgtgacatctgtacttgggaataagacagag gaaaggataccgttctttcatggacatgtattcgagaactccgagcctggatccaaagta aacggtctcagcatccctgtgaagcgagttgacgcgcagagatggtgttccaactccggc atgcatctgaaactcttgggagacggaagtgaagatttccgggtatttgcccaccacaaa cgcggacacatacttctgaaaacctcgatcatcctggacagagaggagcgctccgagtac ctgctcagcctgggtctgtgctgccaaagctgcgccgttaatgaccatgtggtcgcagaa gttgcatctgtgaaagtggatgttttggacactaatgaccacgagccaacattccctaat gttgatataaaaatgagtctagacgacgccactgctctgcggtctgtggtgtataaagtg accgcggaggatacagacagcgggaaaaacgctgaactaatttactttgctcttcccaaa aatggcagtttttatgtggttccaaaaactggagatgtactgcttgtggactctatattg ggtcttaccgcgcccataaagtttaacgtgtttgcgatggaccacggctggccctcacgg accagtcagagtattgacatcgagattaatccccggcaatggccagcggttccacggcca tcccatggtgaaccgaatagcagacaacctcggaagtcgaggtccctgctagagtcgagc gagccgatcgtactaaatgtttccgaggatgccagtatcggttctgtagtaatgaacttg tacccggtgaggtttcaggctgccagctttgagttgatggatcccggtgtggacagctca ccggtcacggtgagtcgggacagcggagatatagtaattacacggcgcctggaccgggag acggaacctctcgtggagattactgtgaaagttcaggataaaagaggtccagactggtac ctggtacggctggagctgacggtgactgatgtgaatgacaatgttccggaatggaccatg gttccctccccctacctggcagtggtatctcccaacgccctggccgggtcactggtctac aagctccacgcccaggacggagatgagggcaacaacggggaggtggagtacttcctgtct gatggtggtgacgggcgtttcgaggtggacagaaagagtggtcatgtccggaccacgggg ctgccacttcagagggacaaagagtacctgttgacagtggtggctgctgaccggctgggt agccgtagtcccccagtggtggtgtcagtcatagcaggagccagagcaccacagttctcc aacgcatccttcattatttcactacctgagaacacaccagagggacagcccttcctggca actctagccgtgtccttccagaagcaaccaatcagctacagcctgctcatcaatcccagc agtctgttcagcatgcaggcggacacaggggagatcactctgaccaggaccatagacttt gagatggaccagcacagcttcctgctcatggttagggccagcgaggaccaggacagtctg agcagcgctgctgaggtgcgtgtgatcatcacagacgaaaatgactgtgttcctgagttc ctgcagtccatttacagcaaagacagtgtgccggagactgtaaccacggcaacctctctg ctacaagtgtctgccagtgactgtgactcggacctgaacgctgagttatcctactacact ctgagcccagacttcagcatctctccccacggcaccattttccccgcagggcagctggac tatgagaggcccaaccacctgtatgagtttgtggtgatggctgtggacaagggagatgtg ccccggacaggtacggccactgtacgcatccgcatggccaatgtcaacgacgaggtcccc gagttctcccagcatgtctaccggaccttcgtctcggaggacgccgggcctaacaccctg gttgccacggtgcttgccaaggaccccgacggcgatggaatcacctacagaatcacaacg ggcaacgacgagggcaactttgttatcgacagccagaaaggtctgatccgtctgcgctcc agcccacctcccagactccagggtgtagagtacgtcctgaacgtcacagcgaccgatgac aacgcctctggcggcccccaggccctctcgtccaccgcccaggtcatcgtcggcgtggac gacgtcaacaacaacaaacctgtctttgagaagtgccagcagtaccgggagcggaccacg gtgctagagaaccagcctgcgggggcgttcgtcctccaggtccacgccgtggatgcagac gagggctctaatgggagagtcacctatggattcatgcacaaagacagcactgtgcctgcc ttcagtatccacccagacacaggtgcgattgtgacgtccaggaagtttgaccgcgagcgt cagcgggagtacgctgtgacggtgacagctacggaccaggcagcagatcccctcataggg atctgtcaactcaacatcctcattctcgatgagaacgacaacagccccaagtttgagaac ctacgctacgagtacttccttcgggaggacacaatgattggcaccagtttcctgcgtgtg gcggcccacgacgatgactacagcaccaatgccgccgtcacctactccatgtctaaagag cagccagagtacctgagggtgaaccccttaaccggctgggtctacgtcaaccagcccatc tcacagaggacctacatcacccgggagatagttgccacggacggggggaaccggagcagt tcggtggagctgtccgtcaccatcaccaacgtgaagaaccagcctccgcagtgggacagg gacagctatgatgtggtcatcccagagaataccgtcagggacacacccatagtgactatc aaggccacctctccactgggggaccctagagtgacctataacctggaggatgggatggtg ccggagaccaacatgcctgtacgcttctatctgacccctaaccgtgaggacggctctgcc tccatcctggtggctgagcccctggactatgagaccaccaggaacttcatactgagggtt cgggctcagaatgtggctgcagtccctctggctgccttcactacggtccatctgaacatc acagatgtgaacgacaatgttcccttcttcacctcgtccatctacgaggcgtcggtcaca gagggggcggaggtggggacgtttgtcacgcaggtgtcctccaacgacctggacctggga ctcaacggaaagatctcctactccctgctgaaagaccgcagtggggactaccagtacttc cggattgatcccgagctgggctccatctacacagaggccgtgtttgaccgtgagaccaaa ggctcctacctgctggaggtcaagtcagtggacggctgggagtcagcccgacctgggaaa catggacagcccaactcagacacggcgtacgtgagggttttcatcagcgatgtgaacgac aacaagcctgtctttgctcagacggtgtatgaagtcgacgtggatgaggatgcagacgtg ggctttgccatcctgactgtcagtgctaatgacgaggatgaaggcgccaatgctaagctc cgttaccagatcacgtctggcaacactggcggggtttttgacgtggaaccagaggtgggc accatcttcatcgctcagcctctggactacgagcggaacaagggctacaagctgctggtg ctggcgtcggacgggaagtgggaggactatgcggatgtgatggtcaacgtggtcaacaag aacgacgaggcgccagtgttcacggtcaacgagtactacggctctgtgactgaagagctg gatggatcgcctgtgttcgtgcttcaggtaactgctactgacccagataaggatgctgac caggaggccctgcggtactccctccatggccagggagccgagagcgagttcattattgat gaggtgacggggaagatctacgctcagaggactctgaaccgggaggagcgggccgtgtgg aggtttgtggtcctggccacagatgagggcggcgagggtctgaccggattcactgacatc atcatcaacgtgtgggacatcaacgacaacgcgcccgtcttcacctgcgcccccgattgt cacggtaacgtgccggagaactctgcccccggcacctctgttatggagatgacggccacc gacctggacgactcggccgtgggccagaacgccgtgctctcctataggattgtgggtgat acgggtacaggtggcagtggctctgacatgttcagcattaacccgtccacgggcaccatc tcggtggcaatgagtggcctggaccgggagcaggcagaggcctacctgctggtggtggag gccagggacgggggtggcatgatgggcacgggtaccgccaccatcagggtgacagacgtg aatgaccacgcccccaggttcacagagcggtcctgcttggccagggttcctgagagcagt gagcccaacgcggtggtgctggagatgtctgctgaggactgggacacgggagagaacgct cagcttaccttcagtgtggtggcaggagacccggagcagaagttctccatggtgagccac cggcaggagcaacgtggcaccctgagactgaagaagaggctggactacgagaggacaagt gagcagcgcttcaacctcaccctgaaggtcgaagacctggacttctcaagcttcatccac tgtatcatagaggtagaggactgtaacgaccacacacccatcttcatcgcactctcccag ccgccggcgcccctggccgaggacgtgcctgtgggcagcagtgtggccaggctgacggcc agcgactctgactcaggccaaaacaaggagatcacctacaaaatcctccaggagtcagac attctgggccagttctctgtagaccagtctggtctagtcactgtgaccagcgctctggac agagagacagcagcacagcaccacctggtcatcctggctactgaccacggctctccggcc ttgacgggcagcaccgtcattcagctgactctgctggacgtcaacgacaacgggccagag tttgaggcagtgtacaccccagtggtgtgggagaacgtcgctggtccccagctggtcaga ctcaaccagacctccacactgctgcgggccgtagaccgagactcagcggagaacggatct ccattctacttcagccttcccttagagctaaaccacagcaacgacttctacctgcaggat aacggaaacggcacggccaccatcacagccctgagggccttcgaccgggagaggcagaaa gagttccacctgcagatcatcatgagtgacagcggccatccacccaagacggtcactaac actctgaccatcaccataggagacgagaacgaccatgctcaccaggcaggagagaaggag atctttgtcaacagtcacagagggaggatgccgaccactgtcctggggaaggtctacgcc ccggatcctgatgattgggacaacaagacctatgcctttgagggacatgtgcccaattac ttcctcctgaacaagcggacgggattcctgatcattaaggagaacactcccccaggcagc tacgagtttcaggtgcgcgtgtcagacggagtgtggccagacgctgtctctggggtaaca gtgtatgtgagggagctgcgtgacgaggccatctacaactctggatccctccgcctggca gacatcacagcgaaggattttattgagcagcgtggtagcttgaggagtcgttatgaactg ctggtggacttcctgtcggagatgttggcggtgggcgttgacgacatcaacgtcttcagc ctgacggacgtcagggagaggacactggacgtgcgcttcgcagtgcacagcagtcccttc ctcagagcagagagactacagggatacctcgccgctcacaaacaaaagctgcagtcgttc ctgcaagtgaacgtcagccaggtacatgtggatgagtgtgccaacacagactgtggcggc agcggcggctgctccaacgtgctgagtgtcagcgatacgcccactgtggtggattctggg agcatgtcactggtgtcggtgacggtggagtccacagcagtatgcagctgctccgggaga gaacatgtccacaagatttgctcctcctatcccagaaacccttgcttcaacgggggcatc tgtgtcgacactccgagcgggtacagatgccagtgccctacgcagttcgaggggccagag tgccagcagaccaaacacagtttccatggcaacggctatgcctggtttcctcccataagg ccttgcttcgagagccatctctccctggagttcatcacggaggttgcagatggtctgctg ctctacagtgggcccctggcccagctacagccctgggacctcgaggacttcatggccata gaattgatcgatggcactcccacactcaagataaaccatggctcgggcacactggtcctg cagttgccaggcaacgtaaacgtggcggacagacggtggcaccgtctggacgtgaggagc aacagtaaggaggtacgcttcacactggaccgctgtgccggggccaccgtcatggagatg gagggagtgggcagctggctgaccacagaggaccactcgtcctgtgaggtcactggtgtc acgcccaacctggacaggcacctgaatgggacccaggtgttacagctgggtggagtcaat gaggacctgccctatgtctacccgcagttacaacacaaacactttaccggctgcatcagg aacctcgttgtcgacagcaagttctatgacttgggcaatccagcggactctgtgggcagc tccccagggtgcctgactacggatgggagctgtgtcaacgtgggcatcccctcctgtggc cctcggggtcgctgccatggagagtggggctccttcagctgccagtgcataccggggtac actgggactcagtgtgagcaggaagttccagagtattcctttgatgggaggagtcatgtt cattaccagttggcatctcctctgccagcccggcggacccaggcacaggttctggtccgg acccgcaaacatggtagtgccatcctcagcctactgtccaaggaacagactgaatacctg cgcttagagatctaccagggcctactggctgtcttctataacctgggagacggagactac aacctgacactgccctcctatcgcctggacaatggtgagtggcacgaggtctacctggat cgacacgacaacgagctgaccctgcgtctggatggaggcgggggcagacgggaggccagc gcggctccaggccggagccgagagatcatcaccgacccaacagtggtgatgctgggaaac gccttctcctcaggctccaacaagagcttccagggttgcatgcgggacctgaggctgaac ggtcgatacgtacctctggatggccagtccagagacgggatctctgtggtcagctcccag gggctctctgtgggctgctcctccgactcctgcaagaggaaccagtgtagtccccccttc acctgcgttgacctctggagagtccatgagtgcagatgtccccctggccacatggtgaag gtgaacggtactgtaaagttctgcgtctacaccctgtgtgccagtcggccgtgccaccgg ggcacctgcgtggcacagtcgccctccaagttcacgtgccactgccccgagggctaccgg gggcgccactgcgaggtggcgctggccatctaccgagacgacgtgggcctgagcttcagc tccctgttcgccatttgcatctgcttcatggctctgctagtgctgctgctgggcatcttc ctgtacacccgctggcgcagttacaagggcctaaaggagggcgtttaccacgtgtcagct caccatgacggctgggaggacatcagagagaacgtgctcaactacgatgaggaaggagga ggagaggaggaccagaatgcctatgatatggccgagctacagaagtctctccagcccagt cctgcccagtctgtccagtacagccgctccagggccatccaccaacatcaccacacccag caccaacatccccagccccaggacactcttagcaggttgggcgccaacaccgccctctcc tcctttaccaccaccctgcggagggacgtgccgcccaccaggacccccgcccagggccag agcaggcccctcctgctggccagaaagagcctgtccttctccagccaggacctggcccgc tacctgtgtgagatcatccgggatgctgaccaggctccagagacggcccccttcgactcc ctgcaggtgttctccacggaggggggaggctcgctggccgggtccctcagctccttcagc tcagccgggctggaggaggacacggctaagggccaagactccctgaaggattggggccca cgttttgagaaactcaaagccctctacgagaagaccgaggccagtgacctctaa

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