Oncorhynchus nerka (sockeye salmon): 115112210
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Entry
115112210 CDS
T07952
Name
(RefSeq) polypeptide N-acetylgalactosaminyltransferase 18-like
KO
K00710
polypeptide N-acetylgalactosaminyltransferase [EC:
2.4.1.41
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00512
Mucin type O-glycan biosynthesis
one00514
Other types of O-glycan biosynthesis
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
115112210
00514 Other types of O-glycan biosynthesis
115112210
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115112210
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.41 polypeptide N-acetylgalactosaminyltransferase
115112210
Glycosyltransferases [BR:
one01003
]
O-Glycan biosynthesis
Mucin-type
115112210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glycos_transf_2
Ricin_B_lectin
Glyco_transf_7C
RRM_ACIN1
RicinB_lectin_2
Motif
Other DBs
NCBI-GeneID:
115112210
NCBI-ProteinID:
XP_029494949
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Position
LG27:52498833..52584632
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AA seq
609 aa
AA seq
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MACTRRTKTLVSTCVILSGMTNIVCLLYVGWVTNYIANVYIKVPMPVPEKKLEGDKKGET
LRIIERLDRLENVVNQHIQETPLKGEDVLGDKSFSDSSLFAHWGQELSADSRRVALKMFQ
YYGYNGYLSDRLSLDRAIPDLRPDGCKNITYPSNLPQVSIVFIFVNEALSVILRSIHSAM
HRTPSHLLKEIILVDDNSDNDELKEKLQDFVSETNSQRPGFIKVVRHDKQEGLIRSRVSG
WRAATAPVVALFDAHVEFNIGWAEPVLMRIQEDRTRIISPSFDNIKYDTFEIEEYPLSAQ
GFDWELWCRYLNPPKSWWHQANNSAPIRSPSLIGCFVVDRLYFEEIGLLDEGMEVYGGEN
VELGVRVWQCGGSVEVLPCARIAHIERAHKPYTEDLTSHVRRNALRVAEVWMDEFKSHVY
MAWNIPQEDSGIDIGDISERKALRKRLQCKTFRWYLVNIYPEMRMYTDTIAYGVLKNSLK
SDLCLDQGPDTDNVPILYLCHGMTPQNVYYTSTQQLHVGVLSPTIDDDDNKCLVDVNSRP
RLIECSYATAKRMKLHWLFTQGGSIQNRKSKRCLELVASNDNESGYQLALQKCTGQKWSI
TNTLPGSAL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcaccaggagaaccaaaactttggtgtctacatgcgtgatcttgagtggcatg
accaacatcgtgtgtctcctctatgttggatgggtcactaattatatcgcgaatgtatac
atcaaagtccctatgcctgtcccagagaaaaagttagaaggcgacaagaagggggaaacc
ctacggatcatagaacgacttgatcgacttgagaatgtggtcaaccagcacatacaagaa
acccccctgaaaggagaggatgttctaggagacaaatcgttttctgactcgtccctgttt
gcccactggggtcaggagctgagcgctgacagccgcagggtggccctgaagatgttccag
tactacggttacaacggctacctcagcgaccgcctctccctggacagagccatcccagac
ctcagacctgatgggtgtaaaaacatcacgtatccatctaacctccctcaagttagcatt
gtgtttatctttgtgaacgaggccttgtccgtcatcctgcgttccatccactctgccatg
cacaggaccccctcccacctcctcaaagagatcatcctggttgatgacaacagtgacaac
gatgagctgaaggagaagctacaggactttgtgtctgagaccaacagccagcgtcccggc
ttcatcaaggtggtgcgccatgataaacaggagggtctgatccgctccagggtgagtggg
tggagggcggccaccgctccggttgtggccctgttcgacgcccacgtggagttcaacata
ggctgggctgagcctgttctcatgagaattcaggaggacagaacacgcataatctctccg
tcgtttgataacatcaaatacgacacgtttgagattgaagagtacccactgtctgctcag
ggcttcgactgggagctgtggtgccgctacctcaacccacccaagtcctggtggcaccag
gccaacaacagtgctccaattaggagcccttctctgattggctgcttcgtggtggacagg
ctgtactttgaggagattggcctgcttgacgaggggatggaggtgtatgggggcgagaac
gtggagctgggtgtcagggtgtggcagtgtgggggcagtgtagaagtcctgccctgtgcc
cgtatcgcccatatagagcgtgcccacaagccctacactgaggacctgacgtctcacgtg
agacggaacgccctgagggttgcggaggtctggatggacgagtttaagagccatgtgtat
atggcctggaacatccctcaggaggactcaggaatagacattggagatatctctgagagg
aaggcccttaggaagaggctccagtgtaagacgtttcggtggtacctggtcaacatctac
ccagagatgaggatgtacacagacaccattgcatatggagtgctgaagaactctctgaag
agtgacctgtgtctggaccaggggccggacaccgacaacgtccccatcctgtacctctgt
catgggatgacacctcagaatgtgtactacaccagcactcagcagttacatgtaggggtg
ctcagtcccaccatcgacgacgatgacaacaagtgcctggtggatgtgaacagccgaccg
cgcctcatcgagtgtagctacgccacagccaagcgcatgaagctccactggttatttact
cagggaggttccattcagaacaggaaatcgaagcgatgccttgagctggtggccagcaat
gacaacgagtccgggtaccagctggcccttcaaaaatgcactggacagaaatggtccatc
acaaacacactgcctggcagtgccctatga
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