Oncorhynchus nerka (sockeye salmon): 115112254
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Entry
115112254 CDS
T07952
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 10-like isoform X1
KO
K11841
ubiquitin carboxyl-terminal hydrolase 10 [EC:
3.4.19.12
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115112254
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115112254
Enzymes [BR:
one01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115112254
Peptidases and inhibitors [BR:
one01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115112254
Ubiquitin system [BR:
one04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115112254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
PAM2
Motif
Other DBs
NCBI-GeneID:
115112254
NCBI-ProteinID:
XP_029495044
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All DBs
Position
LG27:complement(54505429..54542958)
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AA seq
882 aa
AA seq
DB search
MASQSNVNQYIFGEFSPDEINQFFVTPRCYVELPPFNDKVSCVSQSSGSYCTPAVPYIAE
SMRRQVCGEDYQRIEFGVDEVMDLEPVGVKDPLFKVSSTLNPQAPEFILGCQPSQKVPQT
ATALSPAADVPDGAQYNSLDEPDGPDGPDSEPSAMDGNQNCQDGDGGLGQRERKKKKKRP
PGYYNYLEGSGPNSGGMGVDGPPGKGLVNGHVLSGPHLGSQDMVGKVLSGGGLSTSAPVA
TAAANQRTCDSPDESSLDFTSGAASLSDGKDAASSSSSSSSQSSGVAEGGRTAEQQPENM
APESPELLGSGGHSPCPTSPPPPSVAVASPPATIATATTEEEEETRDSGVANGLAEPHAG
ISADRHKEASETLEQPQQQSPAPSVEPASSPDSEAQPAVAEQPKSPAPPAAPAANPLKSW
ASLFHNSKPLPGSPQAYVEVKNVVEVVAPSLAAVEQHEKAGEVKENPVHVSEDPMAPKLA
ELIENVKLIHKPVSLQPRGLINRGNWCYINATLQALIACPPMYHLFKSIPLFNDTQRPCT
STPMMDNFVRLVNEFNNMPVPSKAKQQAAGEKIIKDIRPGAPFEPNYIYRLLTLIKSSLS
EKGRQEDAEEYLGFTLNGLHEEMLALKKLISPQEEKAPTPNGPESQSGVDDAAADKEEGS
EDEWEQVGPRNKTSITRQADFVRTPITDIFGGHIRSVVYQQNSKESATLQPFFTLQLDIQ
SEKIRTVQEALETLVARESVQGYTTKTKQEIEISRRVTLEELPPVLVLHLKRFVFEKTGG
CQKLIKNIDYPVDLEISKDLLSSGVRSKIFKGQRTYRLFAVVYHHGNSATGGHYTTDVFH
IGLNGWLRIDDQSVKVINQYQVVKQTAERTAYLLYYRRVDLL
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcagagtaacgttaaccagtacatcttcggggagttcagccctgatgagatc
aatcagttcttcgtgactccacgatgttatgttgagcttccccccttcaatgacaaagtc
tcctgcgtcagtcagtcttcaggaagttactgcactcctgctgtgccttacattgcggag
tctatgagacggcaggtttgcggcgaagactaccagcgcatagagtttggtgtggatgag
gtgatggacttggagcctgtgggagtgaaggatcctctcttcaaggtgtctagcactctg
aacccccaggctccagagttcatcctgggatgccagccgtctcagaaggtcccgcagaca
gccacagccctctctccggcagcagacgtcccagacggagcacaatacaactcactggac
gaaccggacggacctgatggcccagactctgagccctccgccatggacggcaaccagaac
tgccaggatggggacgggggcctgggccagcgggagaggaagaaaaagaaaaagcgcccg
ccaggatactacaactacttggagggctcaggtcccaatagcggtggcatgggagtggac
gggcctcctggaaaggggttggtgaatggacatgttcttagcggccctcacctcgggtcg
caggacatggttggtaaggtgttgtcagggggcggactttccacctcagcccctgtcgct
acggcagcagcgaatcagaggacttgtgatagccctgatgaatcgtctttggacttcacg
agtggagctgcctctttatcagatggtaaagacgcagcctcctcctcttcttcctcctcc
tctcagagcagtggggtggcagagggaggcagaactgcagagcagcagcctgagaacatg
gctccagagagccctgaactgctgggcagcggtgggcacagcccctgccccacctcccct
cctcccccctcggttgctgtggccagcccccctgccaccattgctactgctactactgaa
gaagaggaggagactagggacagtggggtggctaatgggctggctgagccccatgctggc
atcagtgcagacagacacaaggaggcctctgagacgttggagcagccccagcagcagtcc
ccagctccctcagtggagcctgcttcctccccagactctgaggcccagccggcggtggca
gagcagcctaagtcgcctgcccctccggctgcgcccgctgccaaccccctcaaatcctgg
gctagcctcttccacaactccaagcctctgcctggaagccctcaggcctatgtggaggtg
aagaatgtggtagaggtcgtggctccctccctggctgctgtggagcagcatgagaaggct
ggggaggtgaaggaaaaccctgtccatgtatcagaggatcccatggcccctaaacttgca
gaactaattgagaatgtgaagttgatacacaaaccagtgtctttgcaaccaagaggactg
atcaacaggggaaactggtgctatatcaacgctacattgcaggccctgattgcttgcccc
cccatgtatcacctgtttaagtccattcccctgttcaatgacacccagagaccctgtact
tccacacccatgatggacaactttgtaaggcttgtcaatgagttcaacaatatgcctgtg
ccatccaaagccaagcagcaagctgctggtgaaaagataataaaagacattcgaccaggt
gctccttttgaacccaactacatctacagactcctcaccctcatcaagtcgagtctctct
gagaagggtcgacaggaggatgcggaggagtacctgggtttcaccctcaacggactgcac
gaggagatgctggctttgaaaaagctaatctcccctcaggaagagaaagcccccacaccc
aacggcccagagtcccagtcaggtgtggatgatgctgctgctgataaggaggaggggagc
gaggacgaatgggagcaagtgggcccccgaaacaagacctccattacccgtcaagctgac
tttgtccgcacccctatcactgacatatttggagggcacatccggtcggtggtgtaccag
cagaactctaaggagtcagccaccctgcagcccttcttcaccctgcagctggacatccag
tcagagaagatccgcaccgttcaggaggccctggagaccctggtggcacgggagtcagtt
cagggctacaccactaaaaccaagcaggagattgagatcagccggagagtgaccctagag
gagctccctccagtgctggtgctccatctcaagagatttgtgtttgagaagactggaggc
tgtcagaaactgatcaagaacattgattaccctgtagacctggagatcagcaaagatctc
ctctcttcaggggtgcggagcaaaattttcaaaggccaaagaacctacaggctctttgca
gttgtctatcaccatgggaacagcgctacaggcggccattacaccacggatgtcttccac
atcggtctgaacggctggctgcgcattgacgaccagtcagtgaaggtcatcaaccagtac
caggtggtgaagcagactgctgagcgcactgcctacctgctgtactaccgtcgcgtcgac
ctgctgtag
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