Oncorhynchus nerka (sockeye salmon): 115112260
Help
Entry
115112260 CDS
T07952
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115112260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AXH
ATXN-1_C
Motif
Other DBs
NCBI-GeneID:
115112260
NCBI-ProteinID:
XP_029495056
LinkDB
All DBs
Position
LG27:complement(54664188..54671054)
Genome browser
AA seq
793 aa
AA seq
DB search
MKPGHERNQECLPPKKRDLNNSTSSSSATGGAGSGVGGGEEVPSTQSSGVGSDTQGGGTA
EEWLHAQPGLHYGVESAEGLQGLPVDQYSMLYRVALPSVSYSQTNLHPVLSHISPAYTVP
SSLLQHHPGISYPPLGYAQIPHSSFQFVSPYGAVPYAVPPGFVPSTLISPSVALSQPHLV
PYQSVIQEGLVSPPTQTHVSAHAFAKVGSSGGVPLMLTSEQAAQHLGPLPAAELSPRGVP
VFYHPQGTRAAPAPRDPYSGEQETDREVNGGEREQAAREMLQDSVYNARNARLLQAASAS
VALEHSQDRSLKSRRLDERASPGQRSTPDTDLEVQQVVGRLASPVQGVSGGRKEVSFGPL
NLSQGSQRGREAHGESTGRTAYAIHPVVYGDPRVTAHQQQAGQPGHAVILANGQTVLVPL
DYHQQPPQHYPSRTNDDTSAVTMASPTTYSKASESPARVCLLDRAVVELAAVEQQPISVP
VAAALTQALAPTPNPAPSNPSHFMKGAIIQLATGELKRVEDLQTQDFVRSAEVSGGLKID
SSMVVDIRTSQQRPGLVALHFTVGEQQSKVTIDVPPEHPFFVFGQGWSSCSPERTAQLYG
LACHHLQVGDVCVSITLQQPPQQQKQPLQQQQQQQQQQQTQARTSTKANSTSGSIGQSMG
PPAPQQPRPQPHFRMERVHRERERGDKEEPMQLGGVVQSEMPTRPNRTSTEQTRSQSSYY
LPTEGSARPGAGLGVVSTVSSASQRRWSAPGLQRYMKVEEGARPQLGPSGSSRPSFIPQE
VKLSIEGRSNAGK
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgggtcacgagcgcaatcaggagtgcctgcctcccaagaagagggatctcaac
aacagcaccagtagcagtagtgctactggtggggcaggaagtggggtgggagggggggag
gaagtgccctccactcagagctcaggggtcggtagtgacactcagggaggtggcacagca
gaggagtggctgcatgctcagcctggtctacactatggagtagagagtgctgagggcctc
caagggctgcctgttgaccagtacagcatgctctatagggtggctctcccttctgtctcc
tactcccagaccaatctacacccagtgttaagccatatctctccagcttacactgtcccc
tcatctctcctacagcatcatccaggtatctcctatccccctctaggctatgcccagatc
ccccactcctctttccagtttgtctctccatatggtgcagtcccttatgcagtcccccct
ggctttgttcccagcaccctgatctccccctcagttgccctctcccagccccacctggtc
ccctaccagtcagtcatccaggaggggttggtctcccctcctacccagacccatgtatct
gcccatgcctttgccaaagtggggtcgtccggaggggtcccgctgatgctgacctcggaa
caggctgcccagcacctgggcccgctgcccgccgcagagctcagtcctcggggagtgcct
gtcttttaccaccctcagggcaccagggctgcgcctgcccccagggacccctacagcggg
gagcaggagacggatagggaggtgaatggaggggagagggagcaggcagccagggagatg
ctccaggactcagtctacaatgccaggaatgcaaggctgctgcaggcagcatctgcctct
gtagcactggagcactcacaggacagaagcctgaagagccgcaggctggacgagagggct
tcgcctgggcagcgcagcaccccagacactgacctggaggttcagcaggttgttggtcgc
ctagcctctcctgtccaaggtgtgagtggagggcgcaaagaggtgtcctttggtcccctg
aacctatcccagggctcccagagaggcagagaggctcatggggagagtactggccggaca
gcatacgcgatccaccctgtggtgtatggagaccccagggtgacggcccatcaacagcag
gcagggcagccaggccacgcggtcatcttggccaatggacagacagtcctggtcccctta
gactatcatcaacagccaccccagcactatcccagccggaccaatgacgacacctctgct
gtcaccatggcctcccccaccacctactctaaagcctctgagtctccagccagagtgtgc
ctcctagacagggctgtggtggaactggccgccgtggagcagcagcctatttctgttcca
gtcgcggcagccctcacacaggccctggccccgacgcccaaccctgccccctccaatccc
tcccatttcatgaagggggccatcatccagctggccacgggggagctgaagcgtgtagag
gacctgcagactcaggattttgtgcggagtgctgaggtgagcggggggctgaagatcgac
tccagcatggtggtggacatcaggaccagccagcagagacccggcctggtggcgctgcac
ttcacagtgggcgagcagcagagcaaggtgaccatcgacgtgcccccggaacaccccttc
tttgtgtttggccagggctggtcctcctgcagcccagagcgcacggcccagctctatggc
ctggcctgccaccacctgcaggtaggagatgtgtgtgtgtccatcactctgcagcagccg
ccccagcaacagaaacagcccctgcagcagcagcagcaacaacaacagcagcagcagacc
caagccaggacttccaccaaagccaactccacatcagggtccatcggccagtccatgggg
ccccctgccccccagcagcccaggccacagcctcacttcaggatggaacgcgtccacagg
gagagggagaggggggataaagaggagcccatgcaactagggggtgttgtgcagagtgag
atgcccaccagaccaaataggacttcaacagagcaaactaggagccagagcagttactat
ttgcccacggagggttctgctcgtccaggggcggggttgggagtggtgtcgacagtgtcg
agcgcgtctcagaggcgctggtccgcccccggccttcagaggtacatgaaggtagaggaa
ggggcgcgccctcagctgggcccctccggctcctctcgaccctccttcatcccacaggag
gtcaaactgtccatcgaggggcgctctaatgctgggaagtag
DBGET
integrated database retrieval system
