Oncorhynchus nerka (sockeye salmon): 115112268
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Entry
115112268 CDS
T07952
Name
(RefSeq) SAFB-like transcription modulator
KO
K25093
SAFB-like transcription modulator
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115112268
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Other domain-containing proteins
RRM domain-containing proteins
115112268
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GFIT
Motif
Pfam:
SAP
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
115112268
NCBI-ProteinID:
XP_029495075
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All DBs
Position
LG27:54838992..54852728
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AA seq
1105 aa
AA seq
DB search
MHISVGCDPPIHILRITLGPLSEHACFPSAHTSLQQHIQQGKMASGAISTESKKITDLRV
IDLKSELKRRNLDVTGVKNVLIARLKQAIEEEGGDSETIEIPLPADTPNRKNAKAKGKKV
DSDTDNPMEDESFSKEDESFSKEDESPTKEDESPTKEDESPTKEDESPTKEDESPTKEDE
SPTKENKYFSKEGDKDDVEEDITDTDDGTRENSKPPPSEDGLPETEVEAEAEAEAEQVEE
IETEVAVSAKEDEDDNISVTLQNEDAITLDVDGDDLLETGKHVKLPDSEADKGCDKPEAS
AETSPKDAMKMEVEGHKDGKKDDGTKVDSSKKESRDASKKAEMGDKDKDSGKKGPSSTGA
SGQGKSSSKDRDGKATKDDKGSISSSSASSSTRNIWVSGLSSNTKAADLKNLFGKYGKVF
SAKVVTNARSPGAKCYGLVTMSSSTEVGRCISHLDRTELHGQQISVERVKSDPFKKEPSK
KESDDKTSSSKSSDKRSALTNKTSTSKTQPSSKKEEKKSDKPSDKDGKDSSKKQESKSTT
SSSGPDASKKDDKKHGGRTKSPGKMVVIDHAKGDLNKVRPPFRRGRFDKPGFTTNNNMMQ
RRPRYFMPPEEMEMNRVRVFPNKGGSKDILPFEKMKEQRLRERMVRLERVRRAVELRRRR
EIAERERRERERISLIREREERENLLRERQRLEVERQKLERERMERERLERERIRIEQER
RKEAERMAREREELRRQQEQLRYEQEKRNNLKRGRDVDHSRRDDPYWNGNKKIQPESEGR
VNQGSDYNRQQNRFTEFSPRERGRGFPEAAAVEPNTIERRNRFNSEPEAKKSRPAARRDS
SGFERYPKNFETVRRAEPPPTPRADIRDTDRREIRDRDERRAAPMPERRAAPMPERRAAP
IPERRAAPIPERRAAPMPERPAGGRAPMPGMSHTGRSPRGSGHAGHATHTGHAGWKNDGS
MSAPKGVIRGAVRTGGMRPERSGRDGQGPALRGGSSASRGRSNFSGRDGGRPMVMADQHF
SSGRQVVVERHGRDQPAPRKEWHGGAGSQGGGFPDSRRMGDSRGSMMAPHSSHSSSAMNR
IVQITNSSMSSVGGFKPFKGAPRRF
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgcatatttcagttggatgcgatccgccaatacacattttgagaataactttggggcca
ttgagtgagcatgcgtgcttcccttctgcacacacaagtttacaacaacacatccagcaa
ggtaaaatggcgtcgggtgccatttcaacggagtcaaagaaaataacagatttacgagtt
atagatcttaaatctgaactcaagcgaaggaatttagatgtcacaggtgtgaagaatgtt
ctaattgcaaggctgaaacaggccattgaggaggaaggtggagattcagagaccattgaa
attccactcccagcagacacgcctaatagaaaaaatgcaaaagctaaaggaaagaaagtg
gactctgacactgacaatccaatggaagatgaatccttctccaaggaagatgaatccttc
tccaaggaagatgaatctcctaccaaggaagatgaatctcctaccaaggaagatgaatct
cctaccaaggaagatgaatctcctaccaaggaagatgaatctcctaccaaggaagatgaa
tctcctaccaaggaaaacaaatatttttccaaggagggagacaaggatgatgttgaagaa
gatataactgatacagatgatggtactcgcgaaaattctaaacctccacccagtgaggac
ggcctcccagaaaccgaggttgaggcagaagccgaggcggaggccgaacaagtggaggag
atcgaaactgaagttgccgtctccgctaaagaagacgaggacgataacatatccgtcaca
ctccagaatgaagatgccatcacgctggatgttgatggcgatgacctcctggaaacaggt
aaacatgtgaaacttccagattcagaggcagacaagggctgtgacaagccagaggcctct
gctgagacgagccccaaggatgccatgaagatggaagtggaaggccataaagatggtaag
aaggatgacgggacgaaggttgactcctctaagaaggaaagcagagatgcctcgaagaaa
gctgaaatgggagacaaagacaaggattctgggaagaaaggcccctcgtctactggggca
tcaggtcaaggaaagagttcttcaaaggacagagatggaaaggccacaaaagatgacaaa
ggaagtatcagcagtagtagtgcaagcagctccactcgaaacatatgggtgagcggcctg
tcctccaacaccaaagcagctgatttgaaaaacctttttggcaaatatgggaaggttttt
agtgccaaagtggttactaatgctcgcagtcctggagccaaatgttatggcttggtgaca
atgtcttccagtacagaggtgggaaggtgcatatcccacctggaccgcacagaactccac
ggccagcagatatctgttgaaagggttaaaagtgatcccttcaagaaagaaccttcaaag
aaggaatcagatgacaaaaccagctccagcaaatcaagtgacaaacgtagtgcgttgaca
aacaagactagcactagcaaaacccagccatcctccaaaaaagaagagaagaagtccgac
aagccatcagacaaagacggcaaggattcatccaagaagcaggagtctaaaagcacaaca
tccagctcaggcccagatgcctccaagaaagatgataaaaagcatggtggaaggaccaag
agccctggcaagatggtggtgattgatcatgccaaaggagacctgaacaaagtgagacca
ccattcaggagggggagatttgacaagccgggtttcaccaccaacaacaacatgatgcag
cggagacccagatatttcatgcctcccgaagagatggagatgaatagagttagagttttc
cccaacaagggaggcagcaaagacatcctcccctttgagaagatgaaagagcagaggttg
cgtgagcgtatggtccggctggagcgcgtccgcagggctgtggagcttcgcaggcggcgt
gagatagcggagcgggaacgccgggagcgcgagcgtatcagtctgattagggagcgggag
gagagggagaacctgctccgggaacggcagaggcttgaggtggagaggcagaaactggag
agggagcgcatggagagggaaaggctggagagggaaaggatccgcatagagcaggagcgg
cgtaaagaggcggagcgtatggctcgtgagcgggaggagctgaggaggcagcaggagcag
ctccgctacgagcaggagaagagaaacaacctgaagagaggccgcgatgtggaccacagc
cggagggatgatccctactggaatggaaacaagaagatccagccagagtctgagggccgt
gtcaaccagggctcagactacaaccgccagcagaaccgctttactgagttcagcccccgg
gagagaggcagaggcttccctgaggctgcagccgttgagcccaacaccattgagagacgt
aaccgcttcaacagtgagcctgaggccaagaagtcccgccccgctgctcgcagggacagc
tctgggtttgagcgctaccccaagaactttgagactgtccgcagggctgagcctcctcca
actccacgagcagacatccgtgacacagaccgcagagagatccgagacagggatgagcgc
cgggctgcgcccatgcctgagcgccgggccgcgcccatgcctgagcgccgggccgcgccc
attcctgagcgccgggccgcgcccattcctgagcgccgggccgcgcccatgcctgagcgc
ccagcagggggcagagcacccatgcctggcatgtctcataccggccgctcccccagaggc
tccgggcatgctggtcatgctactcatactgggcatgcaggatggaagaatgacggcagc
atgagtgcacctaagggggtcatacgtggagctgtgcgtaccggaggtatgcggccagag
cgttcaggcagagatggccaggggcctgctctcagaggaggctcctcagccagccgagga
agatctaacttcagcggccgggatggaggaagacccatggtcatggcagaccagcatttc
agctctggccgccaggtggtggtggagcggcatggccgggaccagccggcccccaggaag
gagtggcatggtggggctggatcccagggagggggcttcccagacagccgcaggatggga
gacagccgtggcagcatgatggccccacactcaagccactcttcgtctgcaatgaacaga
atcgtgcagatcaccaacagttccatgtccagtgttggtggattcaagcccttcaaagga
gcaccccgacggttctaa
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integrated database retrieval system
