Oncorhynchus nerka (sockeye salmon): 115112335
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Entry
115112335 CDS
T07952
Name
(RefSeq) THAP domain-containing protein 11-like
KO
K23211
THAP domain-containing protein 11
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
one00001
]
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
115112335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115112335
03036 Chromosome and associated proteins [BR:
one03036
]
115112335
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2CysHis zinc factors
115112335
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Gene silencing
Transposable elements
115112335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THAP
Motif
Other DBs
NCBI-GeneID:
115112335
NCBI-ProteinID:
XP_029495201
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All DBs
Position
LG27:56146247..56147991
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AA seq
277 aa
AA seq
DB search
MPGFTCCVPGCYNNSHRDRELRFYTFPKDTTQREIWLKNISRAGVSGCFSTFQPTTGHRV
CSVHFPGGRKTYTVRVPTLFPLRGVNERKNRRGRNRKASAAAPVTAPSPGSIVITNVVST
APGAAETAQSDAVTDTATTDGPIVVQIGPDGEYLGSVNPAAQGDGSCFTAVVSSSTDLAG
GDDPPADAAAAAQQQTVQYYSVVSNPLDHAYSLTTGTTSAELLRKLNEQRDIIALMEVKM
KEMKATIRQLRVTEAKLQEEVRERDRLLSAGAAVKKM
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcctggattcacctgctgtgtccctggctgctacaacaactctcatcgggacagagag
ctgcggttctacacatttccaaaggataccacgcaaagggaaatttggctcaagaacatc
tcccgggccggggtgagcggctgttttagtaccttccaacccactactggacaccgcgtc
tgtagcgtacactttcccggtggcagaaagacctataccgttcgagtaccgacgctcttc
ccgctgagaggagtgaatgaacgcaagaatcgaaggggcaggaacaggaaagcgtctgcg
gcggctcctgttacagcccccagtccaggtagtattgtcatcacaaacgttgtttcgaca
gccccaggtgccgctgagaccgctcagagcgatgcagtcaccgacacagctactactgat
ggccctatcgtggtgcagatcggcccagacggcgaatacctcggatctgtaaatccagcc
gcgcagggtgacgggtcctgttttactgcagtcgtctccagctccactgacctggctggg
ggcgacgatccccctgcagatgccgcggccgctgcccagcagcagactgtgcagtactac
agcgttgtcagcaacccgctggaccacgcgtactcgctgaccaccgggaccacctcggcc
gaactacttcggaagctgaacgagcagcgggacatcattgcactcatggaagtgaagatg
aaggagatgaaggcaaccatccgccagctgcgcgtaaccgaggccaagctacaggaggag
gtgcgagagcgggaccgtttgctctcggcaggagcagcggtaaagaaaatgtga
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