Oncorhynchus nerka (sockeye salmon): 115112437
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Entry
115112437 CDS
T07952
Name
(RefSeq) caprin-1-like isoform X1
KO
K18743
caprin-1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115112437
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
115112437
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
EC042_2821
Motif
Other DBs
NCBI-GeneID:
115112437
NCBI-ProteinID:
XP_029495361
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Position
LG27:60160558..60173876
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AA seq
719 aa
AA seq
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MRLNGQCSADSPSAHKGLAIYPLFPVPRRLQLLSWLMMPSATVGHNAVQSSSPELGSGTQ
SEAMKQVLQVIDKKVRNMEKKKGKLDDYQAKKNKGERLNQDQLDALTKFQEVTNNLDFAR
ELQKSFLSLGQEIQKAVKKSARREQLQREETEQRRLKTVLELQFLLDRLGDEQTRQDLKQ
PAAGSPLLTDYNLTALDSFYKLVGPERDHDVRLTDQYEEASLHLWELLEGRDQAVAGTTY
KALKETLDKVLLSGYFDSAQTHQNGVCEKEGEEEEEEEEEEEEQSVAHELSGGGEQPAAP
EGTVTEEYTEAIEVEATEFVNRQFIPETTYSSTGNDQVEEWTAEVQVVNVLQHQPPPQMT
PEPHTVNPVSHTPDPVVRKQVVQDLMAQMQGTYNFMQDSMLEFDGHALDPAIVLAQPMKP
AQSVDLQQMVHSESRLAQPSSGPESTQVLMVSPTPDAYSSTAPLYQPSHTAEPRPQTDGI
DHIQASMSLSSEQSPAPSSLPSAFPPVSTPHSGGINVNAAPFQSMQAVFNLNAPVPPTNE
ADSLKQNQFPSGYGQGFSSQAEHSVEEPDIQQDTLQSAVGGFHTQDQVMSSAAGHQVQGP
GFGRQGQSFYNSRGAVSRGGPRNPRGMINGYRGSSNGFRGGYDGYRPPFSNTPNNGYGQQ
AQFSTAPRDYSNSTYQREGYQPGYKRGAAQGPRGCSRGRGGLFKPSRGMVTQLSGHQAN
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcaatggacaatgctcggctgacagtccctcggctcacaaaggacttgcaatt
tatccactttttcctgtgcctcgccggcttcagcttcttagttggcttatgatgccttca
gcaacagttggccacaatgctgttcagtcctccagcccagagttgggttctgggacccag
tctgaggccatgaagcaggtcctgcaggtgatagacaagaaggtccgcaacatggaaaag
aaaaagggcaagctggatgactaccaggccaagaagaataaaggagaacggttgaaccag
gatcagctggatgccttgactaagttccaggaagtgaccaacaacctggattttgcaagg
gagttgcagaagagcttcctgtctttggggcaggagattcagaaagcagtgaagaagtct
gcccggagggagcagcttcagcgggaggagacggagcagaggcgtctgaagactgttctg
gagctgcagttcctgcttgaccgactgggcgatgagcagacgaggcaggacctgaaacag
cccgctgcaggctcccccctgctcaccgactataacctcaccgcactggacagtttctac
aagctcgtgggcccggaacgggaccatgacgtcaggttgactgaccagtatgaggaggcc
tccctacacctatgggaactgctagagggcagagaccaggctgtggcaggaaccacatac
aaggcactgaaggagaccctggacaaggtgctgctgagtggctattttgatagcgcacaa
acgcatcagaatggagtgtgtgaaaaagagggggaggaggaggaggaggaggaagaagag
gaggaggagcagtctgtggcgcatgagttgtctgggggcggggagcaacctgcagcacca
gagggaacagttactgaagaatacacagaggccattgaagtagaagccacagagtttgta
aacagacagttcattccagaaaccacatacagcagcactggcaacgaccaagtagaggag
tggacagcagaggtccaggtggtcaacgtcctccagcaccagcctcctccccagatgacc
cctgagcctcacactgtgaacccagtctcccacacgcctgaccccgtggtccggaagcag
gtcgtacaggacctcatggcccagatgcaggggacctataacttcatgcaggactccatg
ttggagtttgatggccatgccctggacccagccatcgtgttggcccagcccatgaagcct
gcacagagcgtggacctgcagcagatggttcattcagaatccagacttgctcaaccaagc
tcaggtcctgaatctacacaagtcctcatggtctcccccacacctgatgcctactcctcc
acagcgcctctctaccagccctcccacacagcagagccccggccacagaccgacggcatc
gaccacatccaggcctcgatgtccctgtcgtctgagcagtcccccgccccgtcctccttg
ccctctgccttcccgcccgtctccaccccccacagcggcggcatcaatgtcaacgcagca
ccattccagtccatgcaagcggtgttcaacctgaatgcccccgtgccccccactaacgaa
gcagacagtctgaagcagaaccagttccccagcggctacggccagggcttcagcagccag
gcggagcactccgtggaggagcctgacatccagcaggacactctacagtccgctgtagga
ggcttccacacccaagaccaagtgatgtcgtcggcagcgggccaccaggtgcaggggcca
ggctttgggcggcaaggccagtccttctataacagcaggggggccgtgtctcgcggaggc
cccaggaacccccggggcatgatcaatggataccgaggatcctctaacggtttcagagga
ggatatgatggctatcgccctcccttctcgaacactccaaacaatggttatgggcaacag
gcccagttcagcactgcaccccgggactactccaacagcacctaccaacgggagggatat
cagccaggctacaagcggggagcagcccagggacctcggggttgctctcgaggccggggg
ggactgttcaagcccagccgagggatggtgacccaactatctggacatcaagccaattag
DBGET
integrated database retrieval system