Oncorhynchus nerka (sockeye salmon): 115112467
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Entry
115112467 CDS
T07952
Name
(RefSeq) threonine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115112467
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
one01007
]
115112467
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
one03016
]
115112467
Enzymes [BR:
one01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
115112467
Amino acid related enzymes [BR:
one01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
115112467
Transfer RNA biogenesis [BR:
one03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
115112467
Prokaryotic type
115112467
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
115112467
NCBI-ProteinID:
XP_029495411
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Position
LG27:61503813..61522648
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AA seq
817 aa
AA seq
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MKANSNLKMAECMAARLTAQEEQIELLTLEFSLLRDGLNGGPEVASILASSPELESLRSE
NEKLKFRLVHLRRGLQEELALEGQGKGGTNKGQEKTGKQQPKNRNYDNNKAATHETKPVV
DKEKPENNKKAAHRGVGGRELKPWPGYISERMQLYEELKKESDALLARRAADSQPITVEL
PDGRRVEGQAWVTTPYQLACGISQGLADNAVISRVNGDLWDLDRPLEKSCSLEILRFDND
DAQAVYWHSSAHILGEAMERFYGGCLCYGPPIENGFYYDMFLDGPQGVSSTEFEYLEALC
KSVVKEKQPFERLEVSKETLLKMFKYNKFKCRILNEKVTTPTTTVYRCGPLIDLCRGPHV
RHTGKIKALKIYKNSSTYWEGRSDMETLQRIYGISFPDSKMLKEWERFQEEARNRDHRKI
GKEQELFFFHDLSPGSCFFLPRGAYLYNTLTDFIREEYCRRGFQEVASPNIYNSKLWETS
GHWQHYSDNMFSFPVEQDVFALKPMNCPGHCLMFSHRPRSWRELPLRLADFGVLHRNELS
GTLTGLTRVRRFQQDDAHIFCTMEQIESEMKGCLDFLRCVYDVFGFSFQLHLSTRPEKYL
GDIAVWNQAEKQLENSLNEFGEPWKLNPGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQ
LPIRFNLTFVGKDGDDKAKPVIIHRAILGSVERMIAILTENYAGKWPLWLSPRQVMFVPV
NPTCEEYAKRMCKQFVEAGFMADADLDSSCLLNKKIRNAQLAQYNFILVVGEKEKLTNSV
NVRTRDNKVHGELSVSEVLARLTLLKESRCRNAEEEF
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgaatagtaatttaaagatggcggagtgcatggcagcacgtttgaccgcgcaa
gaggagcagatagagctcctcactctggaatttagcctcctacgagacgggttaaatggt
ggtccagaggtcgccagcattctcgccagttctccggagttggagagcttacggagcgag
aatgagaagctcaaatttcgtctcgtgcacctccgccggggtctccaggaagagctcgcc
ctggagggacagggcaaggggggcacaaacaaaggccaggagaagacagggaaacaacaa
ccaaagaaccgcaattatgataataataaggcagcaactcatgagactaaacctgttgtt
gataaggagaagccagagaacaacaagaaggcggcacatagaggggttggtggcagagag
ctgaaaccttggcctggctacatctcggagcgcatgcagctgtatgaggagctgaaaaag
gagagtgatgccctgctggccaggagagcagcagacagccagcccatcactgtggagctg
ccagatggacgcagggtggagggtcaggcctgggtcactaccccctaccagctggcctgt
ggcatcagtcagggcttggctgacaatgcagtgatttcccgggtgaacggggacctgtgg
gacctggatagacctctggagaagagctgctcactggagatcctgcgctttgacaatgac
gatgcccaggctgtgtactggcactccagcgctcacatccttggtgaggccatggagcgt
ttctatggaggctgtctgtgttatggaccacccattgagaatggcttctactatgacatg
ttcctcgatggaccccagggtgtgtcgagtacagagtttgagtacctggaggcgctgtgc
aagtctgtggtgaaggagaaacagcccttcgagaggctggaggtcagcaaggagacccta
ctgaagatgttcaagtacaacaaattcaagtgtcgcattctgaatgagaaagtcaccaca
cccactacaacagtctacagatgtgggcctctgattgacctgtgtcgtgggccccatgta
agacacacaggaaagattaaagccttgaagatctacaagaactcttctacgtactgggag
ggccgttcagacatggagacccttcagcgtatctatggcatctccttcccagactccaag
atgctgaaggagtgggaacgctttcaggaggaggctaggaacagagaccatcggaagatt
ggaaaggagcaggaactgttttttttccatgacctgagtcctggcagctgcttcttcctc
ccgcgtggagcctacctatacaacacactcactgacttcatcagggaggaatactgtaga
agaggtttccaggaggtggcctctcctaacatctataacagtaagctgtgggagacttca
ggccactggcagcactacagcgacaacatgttctccttcccagtggagcaggacgtcttt
gcactgaagcccatgaactgtcctggacactgtctgatgttcagccacagacctcggtcg
tggagggagctgcctctgagactggctgatttcggggtgctccataggaatgagctatcg
gggacactgaccggccttacgagggtgcgccgcttccaacaggatgacgctcacatcttc
tgcaccatggaacagatcgagtctgagatgaagggctgtctggacttcctccgctgtgtc
tatgatgtctttggcttctctttccagctgcacctttcaacccgtccagagaagtaccta
ggagatatcgctgtctggaaccaggctgagaagcaactggagaacagcctgaatgagttt
ggggaaccatggaaactaaaccctggagacggtgctttctatgggcccaagattgacatt
aagatcaaagatgctattggccggtatcatcaatgtgcaaccattcagctggacttccag
cttcctatccgctttaacctgacctttgtggggaaggacggggatgacaaagcgaagccg
gtcatcatccaccgggccattctgggctctgtggagaggatgatagccatcctcactgag
aactacgctgggaaatggcccctctggctgtccccacgtcaggtgatgtttgtgcctgtc
aaccctacctgtgaagaatatgccaagaggatgtgtaaacagtttgtggaggccggattc
atggcagacgctgatctcgactccagttgcctcttaaacaagaagatccgcaacgcccag
ttagcccagtacaacttcatcctggtggtcggtgagaaagagaagctgactaacagcgtg
aacgtacgtacgagggacaacaaggttcatggagagctgtctgtctctgaggtgctggct
cgcctgaccctgttgaaagagtcacgctgccggaacgctgaggaggagttctga
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