KEGG   Oncorhynchus nerka (sockeye salmon): 115112547
Entry
115112547         CDS       T07952                                 
Name
(RefSeq) tubulin beta-3 chain-like
  KO
K07375  tubulin beta
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04145  Phagosome
one04540  Gap junction
one04814  Motor proteins
one05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:one00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115112547
  09144 Cellular community - eukaryotes
   04540 Gap junction
    115112547
  09142 Cell motility
   04814 Motor proteins
    115112547
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115112547
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:one03036]
    115112547
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:one04812]
    115112547
   04147 Exosome [BR:one04147]
    115112547
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     115112547
Cytoskeleton proteins [BR:one04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    115112547
Exosome [BR:one04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   115112547
  Exosomal proteins of colorectal cancer cells
   115112547
  Exosomal proteins of bladder cancer cells
   115112547
SSDB
Motif
Pfam: Tubulin Tubulin_C 7tm_1 7TM_GPCR_Srsx 7tm_4 Misat_Tub_SegII 7TM_GPCR_Srx Tubulin_2 Tubulin_3
Other DBs
NCBI-GeneID: 115112547
NCBI-ProteinID: XP_029495493
LinkDB
Position
LG27:56895850..56912690
AA seq 826 aa
MMDNTSQHNFIMHHHMELSTLTMYSENSTNNTRAREQNSTTCSLRIPQELFLTLGLISLV
ENILVVLAIIKNRNLHSPMYYFICCLAVSDMLVSVANVVETIVMLLTEHGLLVVTPEMLR
HLDNVIDIMNCSSVVSSLSFLCTIAADRYITIFYALRYHSIMTTQRAVTIIAMVWLTSIT
ASILFIVYHSHTAVIVCLVTFFCITLVFTAVLYMHMFILAHVHSRRIMAIYKSRRQGTSM
KGAITLTILLGVFILCWGPFFLHLILILTCPTTPFCTCFFSYFNLFLILIICNSLIDPLI
YAYRSQELRKTLKELLFCSCVTFRCDSILECLFPWKFTLRVKTKQAQTSKETNGPSQSCF
WKSEHTATGTDTTYSDRMREIVHLQAGQCGNQIGAKFWEVISDEHGISPTGNYEGDSPLQ
LERISVYYNEASSSKYVPRAILVDLEPGTMDSVRSGTYGQLFRPDNFIFGQSGAGNNWAK
GHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRI
MNTFSVVPSPKVSDTVVEPYNATLSIHQLLENTDETYCIDNEALYDICFRTLKLPTPTYG
DLNHLVSATMSGVTTSFRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSACYNA
LSVPELTQQLFDAKNMMAACDPRHGRYLTVAMVFRGQMSMKEVDEQMLAIQSKNSSYFVE
WIPNNVKVAVCNIPPRGLKMSATFIGNNTAIQELFKRISEQFTAMFRRKAFLHWYTGEGM
DEMEFTEAESNMNDLVSEYQQYQDATTEEEGEMYEDDEEESESQAR
NT seq 2481 nt   +upstreamnt  +downstreamnt
atgatggacaatacgtctcaacataacttcatcatgcaccaccacatggagctgagcacc
ctcaccatgtacagtgagaacagcaccaacaacacccgcgccagggagcagaactctacg
acctgctcgctccgcattccacaggagctgttcctgacgctgggcctcattagtctggtg
gagaacattttagtggtgctggccatcatcaagaaccgcaatctgcactcgcccatgtac
tatttcatatgttgcctggccgtctccgacatgctggtcagcgtcgccaacgtagtggag
accatagtcatgttgctcaccgaacacgggctgctagtggtcacacctgaaatgctgcgg
cacctggacaacgtcatcgacatcatgaactgcagctcggtggtgtcatcactgtccttc
ctgtgcaccatcgccgcggatcgatacatcaccatcttttacgcgctgcgttaccacagc
atcatgaccacgcagcgcgccgtgaccatcatcgcaatggtgtggctgaccagcatcacc
gccagcatacttttcatcgtctaccactcgcacaccgccgtcattgtatgcctcgtcacc
ttcttctgcatcactcttgtcttcaccgctgtgctctacatgcacatgttcatcctggcg
cacgtgcactcgcggcgcatcatggccatctacaagtctcgccgccagggcacgagcatg
aagggcgccatcacgctcactatcctgctaggggtcttcatcctctgctggggacccttc
ttcctccaccttattctcatccttacctgccccacgacccccttctgcacctgcttcttc
agctacttcaacctcttcctcatcctcatcatctgtaactcgctcatcgacccgctcatc
tacgcctataggagccaggagctgcgcaagacactcaaggagctgctcttctgctcctgc
gtcacctttcgatgcgattccatacttgagtgtctatttccatggaagttcacgctccgt
gtgaagacaaagcaggcccagacatccaaagagactaatggcccatcacaatcgtgtttc
tggaaatcagaacacacggctactggaacagacacaacttacagtgacaggatgagggaa
atcgttcaccttcaagccggccagtgtggcaaccagatcggagccaagttctgggaggtg
atcagtgatgaacatggcatcagccctacagggaactatgagggcgactccccactgcag
ctggagaggatcagtgtctactacaatgaggcctcatcctctaagtacgtccccagggcc
atcctagtagacctggagccaggaactatggacagtgttcgctctgggacctacggacaa
ctcttcagaccagacaacttcatcttcggtcagagtggagctggtaacaactgggccaag
ggccactacacagagggagcagagctggtggactcagtactggacgtagtcagaaaggaa
tgtgagaactgtgactgtctccagggcttccagctcacccactccctcggagggggcaca
ggctctggcatggggaccctgctcatcagcaagatccgggaagagtaccctgaccgcatc
atgaacaccttcagcgtggtgccctcccctaaagtatcagacacagtggtggagccctac
aatgccaccctgtccatccatcagctgctggagaacacagatgaaacctactgcattgac
aatgaggcgctttatgacatctgcttccgcacgctcaagctccccacgcccacctacggc
gacctcaaccacctggtgtcggccaccatgagcggtgttactacctccttccgcttcccc
ggccagctcaatgctgacctccgcaaactggctgtcaacatggtgcccttcccccgtctg
cacttcttcatgcctggcttcgcccccctcacggcgcgtggcagtgcgtgctacaatgca
ctgtctgtgcccgagctcacccagcagttgtttgacgccaagaacatgatggccgcttgc
gacccgcgtcacggacgctacctgaccgtggccatggtgttccgtggtcagatgtccatg
aaggaggtggacgaacagatgttggccatccagagtaagaacagcagctacttcgtcgaa
tggatccccaacaacgtcaaagtggccgtctgtaacatcccgccccgcggtctcaagatg
tccgccaccttcatcgggaacaacacggccatccaagagctgttcaagcgcatctccgag
cagttcaccgccatgtttcgccgcaaggcgttcctgcactggtacaccggagagggcatg
gacgagatggagttcaccgaggcagagagcaacatgaacgacctggtgtcagagtaccag
cagtaccaggacgccaccaccgaggaggagggagagatgtatgaagacgatgaggaagag
tcagagagccaggcccggtaa

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