KEGG   Oncorhynchus nerka (sockeye salmon): 115112550
Entry
115112550         CDS       T07952                                 
Name
(RefSeq) tubulin beta-3 chain-like
  KO
K07375  tubulin beta
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04145  Phagosome
one04540  Gap junction
one04814  Motor proteins
one05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:one00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115112550
  09144 Cellular community - eukaryotes
   04540 Gap junction
    115112550
  09142 Cell motility
   04814 Motor proteins
    115112550
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115112550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:one03036]
    115112550
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:one04812]
    115112550
   04147 Exosome [BR:one04147]
    115112550
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     115112550
Cytoskeleton proteins [BR:one04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    115112550
Exosome [BR:one04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   115112550
  Exosomal proteins of colorectal cancer cells
   115112550
  Exosomal proteins of bladder cancer cells
   115112550
SSDB
Motif
Pfam: Tubulin Tubulin_C 7tm_1 7TM_GPCR_Srsx 7tm_4 Misat_Tub_SegII 7TM_GPCR_Srx Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 115112550
NCBI-ProteinID: XP_029495494
LinkDB
Position
LG27:57627954..57643233
AA seq 787 aa
MADNTSQHNFIMHHHMELSTLTVYSENRTNNTSAREQNSTTCSLRIPQELFLTLGLISLV
ENIFVVLAIIKNRNLHSPMYYFICCLAVSDMLVSVANVVETIVMLLTEHGLLVVTPEMLR
HLDNVIDIMNCSSVVSSLSFLCTIAADRYITIFYALRYHSIMTTQRAVTIIAMVWLTSIT
ASILFIVYHSHTAVIVCLVTFFCITLVFTAVLYMHMFILAHVHSRRIMAIYKSRRQGTSM
KGAITLTILLGVFILCWGPFFLHLILILTCPTTPFCTCFFSYFNLFLILIICNSLIDPLI
YAYRSQELRKTLKELLFCSCVTFRCDSILECLFPWKFTMREIVHLQAGQCGNQIGAKFWE
VISDEHGISPTGNYEGDSPLQLERISVYYNEASSSKYVPRAILVDLEPGTMDSVRSGTYG
QLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGG
TGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLLENTDETYCI
DNEALYDICFRTLKLPTPTYGDLNHLVSATMSGVTTSFRFPGQLNADLRKLAVNMVPFPR
LHFFMPGFAPLTARGSACYNALSVPELTQQLFDAKNMMAACDPRHGRYLTVAMVFRGQMS
MKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCNIPPRGLKMSATFIGNNTAIQELFKRIS
EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATTEEEGEMYEEDEE
ESESQAR
NT seq 2364 nt   +upstreamnt  +downstreamnt
atggcggacaacacgtctcaacataacttcatcatgcaccaccacatggagctgagcacc
ctcaccgtgtacagtgagaaccgcaccaacaacaccagcgccagggagcagaactctacg
acctgctcgctccgcattccacaggagctgttcctgacgctgggcctcattagtctggta
gagaacattttcgtggtgctggccatcatcaagaaccgcaatctgcactcgcccatgtac
tacttcatatgctgcctggccgtctccgacatgctggtcagcgtcgccaacgtggtggag
accatagtcatgttgctcaccgaacacgggctgctagttgtcacacctgaaatgctgcgg
cacctggacaacgtcatcgacatcatgaactgcagctcggtggtgtcgtcgctgtccttc
ctatgcaccatcgccgccgatcgatacatcaccatattttacgcgctgcgttaccacagc
attatgaccacgcagcgcgccgtgaccatcatcgcgatggtgtggctgaccagcatcacg
gccagcatactttttattgtctaccactctcacaccgccgtcattgtatgcctcgtcacc
ttcttctgcatcactcttgtcttcaccgctgtgctctacatgcacatgttcatcctggcg
cacgtgcactcgcggcgcatcatggccatctacaagtctcgccgccagggcacgagcatg
aagggcgccatcacgctcactatcctgctaggggtcttcatcctctgctggggacccttc
ttcctccaccttattctcatcctcacctgccccacgaccccattctgcacctgctttttc
agctacttcaacctctttctcatcctcatcatctgtaactcgctcatcgaccctctcatc
tacgcctataggagccaggagctgcgcaagacactcaaggagctgctcttctgctcctgc
gtcacctttcgatgcgattccatacttgagtgtctatttccatggaagttcacgatgagg
gaaatcgttcaccttcaagccggccagtgtggcaaccagatcggagccaagttctgggag
gtgatcagtgatgaacatggcatcagccctacagggaactatgagggcgactccccactg
cagctggagaggatcagtgtctactacaatgaggcctcatcctctaagtacgtccccagg
gccatcctagtagacctggagccaggaactatggacagtgttcgctctgggacctacgga
caactcttcagaccagacaatttcatcttcggtcagagtggagctggtaacaactgggcc
aagggccactacacagagggagcagagctggtggactcagtactggacgtagtcaggaag
gaatgtgagaactgtgactgtcttcagggcttccagctcacccactccctcggagggggc
acaggctctggcatggggaccctgctcatcagcaagatccgggaagagtaccctgaccgc
atcatgaacaccttcagcgtggtgccctcccctaaagtatcagacacagtggtggagccc
tacaatgccaccctgtccatccatcagctgctggagaacacagacgaaacctactgcatt
gacaacgaggcgctttatgacatctgcttccgcacgctcaagctccccacacccacctac
ggcgacctcaaccacctggtgtcggccaccatgagcggtgttactacctccttccgcttc
cccggccagctcaatgctgacctccgcaaactggctgtcaacatggtgcccttcccccgt
ctgcacttcttcatgcctggcttcgcccccctcacggcgcgtggcagtgcgtgctacaat
gcactgtctgtgcccgagctcacccagcagttgtttgacgccaagaacatgatggccgct
tgcgacccgcgtcacggacgctacctgaccgtggccatggtgttccgtggtcagatgtcc
atgaaggaggtggacgaacagatgttggccatccagagtaagaacagcagctactttgtt
gaatggatccccaacaacgtcaaagtggccgtctgtaacatcccgccccgcggtctcaag
atgtccgccaccttcatcgggaacaacacggccatccaggagctattcaaacgcatctct
gagcagttcaccgccatgtttcgccgcaaggcgttcctgcactggtacaccggagagggc
atggacgagatggagttcaccgaggcagagagcaacatgaacgacctggtgtcagagtac
cagcagtaccaggacgctaccaccgaggaggagggagagatgtatgaagaagacgaggaa
gagtcagagagccaagcccggtga

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