KEGG   Oncorhynchus nerka (sockeye salmon): 115112565
Entry
115112565         CDS       T07952                                 
Name
(RefSeq) cell wall adhesin EAP1-like
  KO
K03129  transcription initiation factor TFIID subunit 4
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    115112565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:one03021]
    115112565
   03036 Chromosome and associated proteins [BR:one03036]
    115112565
Transcription machinery [BR:one03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     115112565
   Coactivators
    SAGA/TFTC/STAGA complex
     115112565
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     115112565
SSDB
Motif
Pfam: TAFH
Other DBs
NCBI-GeneID: 115112565
NCBI-ProteinID: XP_029495507
LinkDB
Position
LG27:complement(62377990..62413110)
AA seq 737 aa
MASTSDPLEDMLFSEVDEKAVSDLVGSLESQLVGQSNPADTQSENRGAGSTFTANHHLGK
TLPAQVGTTLVQQQQGQHKAGMHQEINSKEISLEKTVTSSSLSSIPSFEEASTTSGTGVN
ATKSGLQSHGTSSITTLPAFGGVATSPLVNSINSTTTSRGSALASGQTSTDIVDHPRKRI
TASLRSASAGIQSLNGTGGAVTSRNNPPAAGTAALISSASAANSSRTVDVTSCVNTTNFT
LSNSRISSTQSAIPLDKGTPTIALQRLPSHIVASIAHNGNGTTVSALVKQGAIGPITSAA
ASQVNHKKEGSEAKSDAPVQSKIVMSSPLGVVNSVINSVSSPSAVSNIAAATTASHVMAK
SAVNVVGQTTTVGMVRPASPAVATATQPLLQPGVPAAQRTVAPQLIVRPPQQPQTTIQLP
PGFTIPPGMVLVRTEMGQLVMVPQQALAQAQAQAQAQAQNNISPRTATPTAGATFRATTP
QKGPMAPAVAVTAPQQAPVVMAPQVQAGAQAASQPALPPQTSVPVAPGASVISQEMQENV
KKCKNFLATLIKLASHNSPSPETSKNVKSLVQDLLDAKIEPEEFTNRLQSELKSSPQPYL
VPFLKKSLPALRLSLLNIQHSLIQPLPQAKATPTTGTSSAIMAVPAVRGRLPNSVNTTGA
SVGAQDTQLPWTHIGARGLTEEQEDTSGVRCLPLTMAMCSHARTPACCRQRLGNKAASTC
CLVPYNTDSQNQRLLTV
NT seq 2214 nt   +upstreamnt  +downstreamnt
atggcgagcacctccgacccactggaagatatgttattttctgaggtggatgaaaaagct
gtgagcgatttagtgggctctttggagtcacaacttgttggacaaagcaaccctgcagat
actcagtcggaaaacagaggtgctgggtctacattcactgcaaaccatcacttagggaaa
acgctaccagcccaagtgggtactacactagtacagcagcaacaaggacaacataaagct
gggatgcaccaggagataaactctaaagaaattagcttagagaaaactgttacatcttct
tcgctgagttctattccgtcctttgaggaagcttccaccacttcagggactggagtaaac
gctaccaagagcggtttgcaatcacatggaacatcatctatcacaacactacctgcattt
ggtggtgtagcaacttctccgcttgtcaacagcatcaacagcaccaccaccagccgaggt
tccgctctggcttcaggtcagacatcaacagacattgtcgatcatccaagaaaacgtata
actgcatcgttacggagtgcatccgcgggaatacagagtttgaacggtaccggaggagcg
gtaacgtcaaggaataatccccctgcggcgggaactgctgcgttgattagcagtgcaagt
gcagcaaactcaagtcggaccgttgacgttacatcttgtgtaaatacgacgaatttcact
ttatctaactccagaatttcttcaactcaatcagcgattcccctggataaggggactcct
actattgctttgcaaagactaccaagtcacattgtagcgagcatcgcacataatggaaat
ggcactaccgtttcggccttggttaaacaaggcgcgataggaccgatcacttctgcagca
gcttcgcaagtgaaccacaaaaaagagggttctgaagcgaagtcggacgctcccgtacag
tccaaaatagtcatgtccagtccgttaggtgttgtcaattccgtaataaactctgtttcc
tctccctctgccgtttccaacatagcagcggcgactactgcaagtcatgtcatggcaaag
tctgctgtcaatgttgttggacaaacaacaactgttggaatggtaaggccagcgtcaccg
gctgtggccacagctacacagcctctgcttcaaccgggagtcccagcggctcaaaggact
gtagccccccagctgattgtcagacccccccaacaaccacagacgaccattcaactgcct
cctgggtttaccatcccacccggaatggtgttagtgcgcactgagatgggtcagctggtg
atggtcccacagcaggcccttgcccaggcacaggcccaagcccaggcccaggcccagaac
aacatctccccccgaactgccacccccactgcaggggccaccttcagagccactacccca
cagaagggccccatggcgccggctgtggcagtgacggctccccaacaggcccccgtggta
atggccccccaggtccaggctggggcccaggctgcctcacagccagccctgcccccacag
accagcgtccctgtagccccaggagcctctgtcatctcccaggagatgcaggagaatgtg
aagaagtgtaagaacttcttggccaccctgataaagctggcttcccacaactctccgtca
cctgagacctccaaaaatgtcaagtcactggtccaggatctactggatgctaagattgag
cctgaggagttcaccaacagactgcagtcagagctcaagtcgtctcctcagccctacctg
gtccccttcctcaagaaaagcctcccggccctgcggctgtctctgctcaacattcagcat
tccctgatccagcctctgccgcaggccaaagccacccccaccacaggcaccagctctgcc
atcatggccgtcccagctgtccgcggccgcctccccaacagtgtcaacaccacgggggcc
agtgtcggggcccaggacacacagctgccctggactcatataggtgctcgtggccttaca
gaggaacaggaagacaccagcggggtgcgatgcctgccgctgacgatggcgatgtgttcc
catgcacggacgcccgcctgctgcaggcagagactagggaacaaggcagcatcaacgtgc
tgccttgttccctacaacactgacagtcagaaccagcgactgctgacggtgtga

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