Oncorhynchus nerka (sockeye salmon): 115112624
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Entry
115112624 CDS
T07952
Name
(RefSeq) homeobox protein SIX2-like isoform X1
KO
K19472
homeobox protein SIX2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115112624
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
115112624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
HTH_NDX
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
115112624
NCBI-ProteinID:
XP_029495518
LinkDB
All DBs
Position
LG28:959624..962769
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AA seq
289 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRNVLREWYTHNPYPSPREKRELAEGTGLTTTQVSNWFKNRRQRDR
AAEAKERYEENNENSNTNSHNPLTSSMNGNKTLLGSSDDDKTPSGTPDHISSSPAMLLAS
NSGLQMHGLAPPPGPSAILVSSLDSVHHHHSLHDTILNPMSSNLVELGS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgcttccaacttttggctttacgcaagagcaagttgcgtgcgtctgcgaggtc
ctccaacagggtggaaacatcgaacggctcgggcgatttttgtggtctttacccgcgtgt
gagcacctccacaaaaatgaaagtgttctcaaagctaaagctgtggtcgcctttcacaga
ggcaatttcagagagctttataaaatccttgagagccaccaattttcccctcacaatcac
ccgaagctgcaacagctttggctcaaagcacactacgtcgaggcggagaagcttcgaggc
cgccctctcggggctgtgggaaagtaccgcgtccgcagaaagttccccctgcctcggtct
atctgggacggcgaggagacaagttactgtttcaaagagaagagcaggaacgtactcaga
gaatggtacacgcataacccctacccttccccgcgggagaagagggagctcgccgagggc
acagggttgacaaccacacaagtcagtaactggttcaaaaacagacggcaaagagaccgc
gcggcagaagctaaggaaaggtacgaggaaaacaacgaaaactccaacaccaacagccac
aacccattgacttcttccatgaatggaaataaaacacttttggggagctcagacgacgac
aaaacgccttcagggactccggatcacatttcctcgagcccggcaatgctcctcgcttca
aactccgggctgcagatgcacggcctcgcgcctccacctgggcctagcgccatcctcgtg
tccagccttgactccgtgcaccatcatcactctttgcacgacactatactgaaccctatg
tcgtctaacctggtcgaactcggctcttaa
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