Oncorhynchus nerka (sockeye salmon): 115112782
Help
Entry
115112782 CDS
T07952
Name
(RefSeq) COP1-interactive protein 1-like
KO
K20478
golgin subfamily B member 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115112782
Membrane trafficking [BR:
one04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
115112782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
Fez1
AAA_13
Crescentin
ADIP
Sec10_N
HMMR_N
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
115112782
NCBI-ProteinID:
XP_029495647
LinkDB
All DBs
Position
LG28:63622951..63632738
Genome browser
AA seq
2058 aa
AA seq
DB search
MGGTAHQHSLQEDFEFDGKQAFHQDPHSGGSESTTPMEEGENMGGGLRSVVEELELERNQ
LQEQILGLEDRCQDLEDRLQLQARIESLQNDSERLQGQLASLRSQQSRDAEKHHLLVTSL
NDQLKGLSDTQECLETSLIEKENTLVKTSEKLELIDSLRDSLMEKEAQHKEVADKLLQSE
NHFTEVSTKCSTFEKQCSELKTSVADLTHKLSVLKEKTLKQEATINTLQNDLDQTNDELD
KLNTTHLEERSQLIHNLQSCEREIDNLRDVLSDKDKEILALSGNIAEYAEQIMVLKQEIK
HKEEDLVRIETALTKSEREAQIIRDSQNSDQQALYTKTAELVEQLKDAETELSKAKEEKE
SRTVEVEELRKQVEEDKRTILELRGEIQQHNVGHRNHLLECETQISSLKEHVTVASQKLQ
ESEGLVSQLREASTSSKTLKDQLQDKEQTYEKELKSVKEERNELNAEVSKHNDDLKTLSN
QLEKQTECQVQLKKEMQEKLETISSLEEKLRAIQEEAEVEQQKFNTELQVRDSEKEKLAK
DLQVKLENISNMKKLLKNMKTEKQQLQADLKEKADELKSQKQLADELNKTSTAALELNSS
LNSQKKGLREENQRLQQDVAGKQKSISEMTDERDSLRNKVSDFETQHSENRKVIEGLLKD
KEELSVRANELNRVLEQNKQSISESLFEKTNECILLTKTLREREETVARLQVQIDSLNTQ
VEQFHHNIAEKEKFVTDQNSQVEAQQSQLSQLQETMYLLQEQETALKTGLTEKDTVLQQK
SDECSSLQNKLGQQKKLLSKLQGETKSLKGQCSQLTQCLEEKEETFRQMTQDCENHKDEL
NKRNESLKSLSSQLGVMNESSAQLESENTELKATLENHAAENNKLRHEMEQRQAEVVGLH
SHIQALSEQNQQLRAAYEIRDQELAQQMHVASELDRRVNVTLEQNTNLCSQLNSLTEEKQ
ILQQELAVQSESISELSKEKNLLQDKLSNFEMQHSENCKMIEGLLKDKTELSVAVEELNK
VLEQNKQTVSESLLDKTNKCTNLTKLLRESEEALAHSQDQVDSLNTQLDQLNNNITEKEK
TIRNQNSQLEAQQRELSQLQETLALLQEQGTALKSGLTEKDTMLQQKAEEWSSLQNKLNQ
LQGETKSLKGQCSQLTQHLEEKEETFRQMTQDCENHKAELNQRNESMKSLSSQLGVINES
SVKLESENTELKTTLENHAAENKKLREEMEQRQTEILDLRDNIQALNEQNVRLKTQLKNS
VTEASKKLEEISVLKAEISNRDSYVSNLTKQLTAACSDRDSLGLNLQQRCESLKQQEMFI
KQLQTKSVEGEGQMSQAITELQTQAQSLQKSLQDKNLSLHEAEKQLSLLREKFTLESEDF
KTQLNSSAETMKQLQDDLRNAVEQSNQLSGRLEEQEAQLKQKGDDYVSLRTYVSELEDST
TQLRGQVDSLTSESFLLKETLKEKVRFILEVQSTSSAVSESLNSKLKTKDTECESLKEQL
SYLQESVLKFNTKDAECESLKEQLSHLQESVSKLNSSLSAQSSEVARLQQALEERGTAVM
DQSKALQELQRRADEAALFKTQFMESTELVSQLQDQIQELSTKSASLSQSAEANQSAFVN
LQEKYATHLEELQEARTMLSQRAEEMSSLNKSLSESNSTVQAAESTIEVLRNESSLLRQD
LRQIQTLNVDLSKQKEDALATHQRSTSTFTVEIERLKSQYLHVAAQVNALTENLEQREMS
LHAINSQYTAQVKQAEHVVSEMQKLEEQNKKLREEIALSKQENQQWLDAAISEKERLQQE
VQKLILERDEHGKSYSSQIQTMQEQLHLQKQQQSSSMNEVMEKMVAEKERLQVEVSVKGE
EITGLKSDIQKIGQTLQDSEKEWLSVLDRETQDKYLIAVQLKSVENEIKSKDFKVQALKQ
DLDSLHEKLAEAATAIRQGSDLLKAKEVEASTSRVQTENILVSVKEKDEHNIELRQALQD
MESELRQLEVSKECSDKDLSVLSLTMSDRLVALEEENVSLQTMLKQLRERHQCEVDSLRG
ELNEVSELLKRTECALND
NT seq
6174 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcaccgcccaccaacacagcctgcaggaggactttgagtttgatggcaagcag
gcgttccaccaggacccacacagtggcggatctgagagcaccaccccgatggaggagggg
gagaacatgggaggtggcctgcggtcggtagtggaggagttggagctggagaggaaccag
ctgcaggaacagatcctaggactggaggaccgctgtcaggaccttgaggaccggctgcag
ctgcaggctcgcatcgagtccctacagaatgactcggagagactacagggtcagctggcc
agccttcggagccagcagagcagggatgcagagaaacaccatctcctggtcaccagcctc
aacgaccagctcaaaggactgagtgacacccaagagtgtctcgaaacttctcttatagag
aaggagaacacattagtcaagacctctgagaaactggagctcatcgacagcctccgagat
tctttaatggaaaaggaggcgcagcacaaagaggtcgccgacaagctgcttcaatctgag
aaccatttcactgaagtttccacaaaatgcagtacctttgaaaaacagtgttcagaactg
aagacatcggttgcagatctcacacataagctgagtgtgcttaaagagaagacactgaaa
caagaggccacaataaacactcttcaaaatgacctggatcagacaaacgatgaactggac
aagttgaacaccacccatctcgaagaaaggtctcagctgatccacaaccttcaaagctgt
gaacgggagattgataacctcagagatgtcctctcagacaaggacaaggagatcttagcc
ctctcgggcaacattgcagagtacgcagagcagatcatggtgctgaagcaggagatcaag
cacaaggaggaggacctggttcgcatcgagaccgccctcaccaaatcggagcgggaggca
cagatcatcagagactctcagaactcggaccagcaggctctgtacaccaagacagcagag
ctggtggaacagctgaaggatgcagagactgagctgagcaaggccaaagaggagaaggag
tcgaggacagtagaggtggaggagctgaggaagcaagtggaagaggacaagcggaccatc
ctggaacttcgaggggagatccagcagcacaacgtgggccatcgtaatcatctcttagag
tgcgaaactcagatctcttcactgaaggagcatgtgactgttgcttcccagaaactacag
gagtccgagggtctcgtctctcagttgagggaagcaagtacatccagcaagacactgaaa
gaccagctccaggacaaggagcagacgtatgagaaagaactcaaatcggtcaaggaggaa
cggaacgagcttaacgcagaggtgtccaaacacaatgatgaccttaagaccctgtccaac
cagctagagaagcagacagagtgtcaggtacagttgaaaaaagagatgcaagaaaaactg
gagacaatatcctctcttgaggaaaaactcagggccatccaggaagaggccgaagtagag
caacagaaatttaacacagaactgcaagtcagagattctgaaaaggagaagttggcgaaa
gacctgcaggttaaattggaaaatatctcaaatatgaagaagctcttgaaaaacatgaag
actgaaaaacaacaactgcaagctgacctgaaggagaaggcagatgaacttaagtctcaa
aagcagcttgcagatgagcttaataaaacatctacggcagctcttgaacttaacagcagt
ttgaactctcaaaaaaagggcctcagagaggagaatcagagattgcaacaggatgtagct
ggaaagcagaaatccatttcagagatgacagatgaaagggattctctgagaaacaaagtc
tctgactttgaaacacagcattcagaaaacagaaaagtcattgaagggcttctgaaagac
aaggaggagctgagtgttagagccaatgaactgaacagggtcctggagcaaaataaacag
tccatttccgagagtctatttgagaaaacaaatgaatgtattcttctaactaaaacactc
agggaaagggaggagacagttgcccgtttacaggtgcaaattgacagtttgaacactcaa
gtggagcagttccatcacaacattgctgaaaaagagaagtttgtcactgatcaaaactca
caagtagaggcacagcagagccagctgtcgcaactccaggaaacaatgtatttactgcag
gagcaggagactgccctgaaaactgggctcacggagaaagacaccgtattgcagcagaaa
tcagatgagtgtagctctttacagaataaacttgggcagcagaaaaagcttctatccaag
ctacagggtgagactaaatcacttaaaggacaatgctcacaactgacccagtgtctggaa
gaaaaagaagagaccttcagacaaatgacacaggactgtgaaaaccacaaagacgagctt
aacaagaggaatgagtcattgaagtcactaagcagtcagcttggtgtcatgaacgagagc
agtgcgcagttggagtctgaaaatacagaactgaaggccactctggagaaccacgcagca
gaaaacaacaagctgaggcatgagatggaacagaggcaagctgaggtggttggcctccac
agtcacatccaggcactgagtgagcaaaaccaacaactccgagctgcttatgagatcaga
gatcaggaacttgcccagcaaatgcacgttgcatctgagcttgatagaagggtaaatgtg
actcttgagcagaacacaaacctgtgctcacaactgaacagtctgacagaggagaagcag
atactgcaacaggaattagctgtacagtcagagtccatttctgaattaagcaaggagaag
aacttacttcaagataaactttccaattttgaaatgcaacattcagaaaactgcaaaatg
attgaagggctactgaaagacaaaacggagctcagtgtagcagtagaggaactcaacaag
gtcctagagcaaaacaaacagactgtttcagagagtttgctggacaaaacaaataaatgt
actaatctcaccaaattgcttagagagagtgaagaggcacttgcacattcacaagaccaa
gttgacagcttgaacacccaacttgatcaactgaacaacaacataaccgaaaaagagaag
actatcagaaatcaaaactcacaattagaggcccagcagagagagttgtcgcaactccag
gagacattggctttattacaggagcaggggaccgcactgaaatctgggctcacagagaaa
gacaccatgttgcagcagaaagcagaggagtggagctctttacagaataaacttaatcaa
ctgcagggcgagactaaatcacttaaaggacaatgctcacaactgactcagcatctggaa
gaaaaagaagagaccttcagacaaatgacacaggactgtgaaaaccacaaagccgagctg
aaccagaggaacgagtcaatgaagtcactaagcagtcagcttggtgtcataaacgagagc
agtgtgaagttggagtctgaaaatacagagctgaagaccactctggagaaccacgcagca
gaaaacaagaagctaagggaagagatggaacagaggcaaactgagatattagatcttagg
gacaacatccaagcattgaatgaacagaatgtcagactaaaaacccaactcaaaaactct
gtcacagaggcatccaagaaacttgaagagatttcagttctcaaggcagagatttctaac
agggacagttatgtgtctaatttaacaaagcaactgacagcagcctgctcggacagggat
agcttaggtttgaatttgcagcagagatgtgagtccctaaaacagcaggagatgtttatt
aagcagttgcaaactaagtcagtagagggtgagggtcagatgagccaggccatcactgag
ctgcagacacaagctcagagtcttcagaaaagccttcaagacaaaaatctttcgctgcat
gaggcggaaaaacagctgagtctactcagagagaagttcaccttagaatcggaggatttc
aaaacccagctgaattcaagtgcggaaacaatgaaacagcttcaggatgatctgcgtaat
gcggtggaacagagtaatcagctcagtgggaggcttgaagaacaagaggcacagcttaag
cagaaaggtgatgattatgtgagtttaaggacatatgtttcagagctggaggattccacc
acacagctcagaggtcaagttgacagcctgacctctgagtcattcctgttaaaagagacc
ctgaaagagaaagtcaggttcatccttgaggtacaaagcacctcctcagctgttagcgaa
agcctaaattcaaaactcaaaaccaaagatacagaatgtgagagcttaaaagagcagctt
tcgtacctccaagagtccgttttaaagttcaataccaaagatgcagaatgtgagagctta
aaagagcagctttcacatctccaagagtctgtttcaaagctcaatagtagcctcagtgcc
cagtcctctgaagtggcacgacttcaacaagccttagaggaaagagggactgccgttatg
gaccagtcaaaggcccttcaggagctgcagagaagggcagatgaagcagccctcttcaaa
acccagttcatggagagcacagagttggtgtcacaactgcaggatcagattcaggaactc
tccactaagtctgcaagcctcagccagtcggcagaggcgaaccaaagtgcctttgtaaat
cttcaggagaagtatgctactcatttagaggagctccaggaagctcggacaatgctttct
caaagggccgaggagatgtccagtcttaacaagtccctcagtgaaagcaacagcacagtt
caggcagcagaaagcaccatagaggtgctgaggaatgagtcttccttgctacgtcaagac
cttcggcaaatccaaacactgaatgtcgacctttcaaaacaaaaggaagacgcccttgct
acccatcaaaggagcacctcaacattcactgtcgaaattgagagactaaaatctcagtat
ttgcatgtggctgctcaggtaaatgcactgacagaaaatcttgagcagagagagatgtct
cttcatgccattaacagtcagtacacagcccaggtgaaacaggcagagcacgtagtgtca
gaaatgcagaaactagaagagcaaaataagaagctaagagaggagatagctctgtcaaag
caagaaaatcaacagtggctggatgcagcaatcagtgaaaaagaacgtctgcagcaagaa
gttcagaaactcatccttgagagagatgaacacggcaagagctacagcagccagatacaa
acaatgcaggagcagttgcatctccaaaagcagcagcaatccagcagcatgaatgaagtc
atggagaaaatggtggctgagaaggaaagactacaggttgaggttagtgtcaaaggtgaa
gaaatcaccggattgaaatcagacattcaaaagatagggcaaactcttcaggactctgag
aaggagtggctatcggtcctggatagagagacgcaggataaatatctcattgcggtgcag
ttgaaaagtgttgaaaatgaaattaagtcaaaagattttaaagttcaagcattgaaacaa
gacctagatagtttgcatgaaaagttggcagaggcagcaacagcaattagacagggttca
gatctgcttaaagcgaaagaggtagaggcatccacatccagggttcagactgaaaacatc
ttagtatctgttaaggaaaaagacgagcataatattgaattgaggcaggctcttcaagat
atggaaagtgagttaagacaattagaggtcagcaaagagtgttctgacaaagatttgtct
gtattgtcactaaccatgtctgatagattagttgctttagaggaggaaaatgtctcccta
cagactatgctcaaacagttgagagaaagacatcagtgtgaggtagattctttgaggggt
gaattaaatgaagtttcggaattgttgaaacggacagagtgtgcccttaacgat
DBGET
integrated database retrieval system
