Oncorhynchus nerka (sockeye salmon): 115112790
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Entry
115112790 CDS
T07952
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2-like isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
115112790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115112790
Transporters [BR:
one02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
115112790
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GFIT
Motif
Pfam:
SNF
Phage_holin_3_3
Motif
Other DBs
NCBI-GeneID:
115112790
NCBI-ProteinID:
XP_029495654
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Position
LG28:complement(45123148..45165283)
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AA seq
668 aa
AA seq
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MTKQPANAPTGFKPLHQPEGAVGVSANKPYNALNQTSTAYPAPQPVPSNESKTFCPTENK
PGEVSKVYGTFKNAAPAVPGSVAANSALRKDSTSSVGGSAARVVPVQCGDPLRATGDQNN
ASGNWTTMSQTTIILGADGNTSVQPGAVTGEDESGDENKARGNWTNKLDFILSMVGYAVG
LGNVWRFPYLAFQNGGGAFLIPYLIMLCLAGIPIFLLEVSLGQFASQGPVSVWKAIPALQ
GCGIAMLIISVLIAIYYNIIMCWTLYYLFASLKGSLPWANCKNEWNTLDCKDKDMLLLDT
CILHDKNITSVKNSSFCLSAQAIGNLTKLVNMTYPDNKTYVSPSEEYFKYNVLHISKGIE
YPGDIRWPLAGCLLLAWLIVYLSLAKGIKSSGKVVYFTATFPYVVLVILLFRGVTLPGAG
DGILYFITPKWEKLNDAKVWKDAATQIFFSLSAAWGGLITLSSYNKFHNNCYRDTIIVCI
VNSATSIFAGFVIFSVIGFMAHELKVPIEKVADEGPGIAFVVYPEALTRLPLSPFWAIIF
FLMLLTLGLDTMFATIETIVTSVSDEFPQYLRKNKPLFTLICCACFFFLGFPMVTENGMY
MLQLVDTYAASYSLVIIAICELIGISYFYGLQRFCEDIEMMIGFQPNRFWRICWAFVTPT
ILTSSSCF
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaacagccggccaatgctcctaccggttttaaaccgttgcaccagccggaggga
gcggtgggagtttcagcaaacaaaccgtataatgcccttaaccaaacgtccaccgcttac
ccggcccctcagccagtaccatccaacgagagcaaaactttctgtcccacggaaaataaa
ccgggagaagtcagtaaagtctatggaacatttaaaaatgccgctccggcggtgcctgga
tccgtggctgcgaactcggccttacgtaaggattccaccagctcagttggtggttctgct
gcccgggttgtccctgtccagtgcggggacccgcttagagctaccggggatcaaaacaat
gcgtcgggcaactggaccaccatgagtcagaccaccatcattctgggcgcagatggcaac
acgtctgttcagcccggcgcggtgacgggggaggacgagagtggagatgagaataaggcc
aggggaaactggactaataaattggatttcatcctgtccatggttggttatgccgtggga
ctgggaaacgtgtggaggtttccataccttgccttccaaaatggtggaggtgcttttttg
atcccctacctgataatgttgtgcctcgccgggatccctatctttttattggaggtttcc
ctgggtcagtttgccagccagggccccgtgtccgtgtggaaagccatcccggctctgcaa
ggttgcgggattgccatgttgataatatctgtcttgatagccatatactataacattatt
atgtgctggacactgtactacctgttcgcttcgttgaagggctcactgccatgggctaac
tgtaagaacgagtggaacacgttggactgtaaggacaaagacatgcttctcttagacacg
tgcatcctccatgataaaaacatcacctctgtaaagaacagctcgttctgcctgtcggct
caagccattggaaacctgaccaaactggttaacatgacctatccggataacaaaacttac
gtcagccccagcgaggagtacttcaagtataatgtcttgcacatctccaaagggatagag
taccctggagacatccgctggcccctcgcaggctgcttgttgctggcctggttgatagtc
tacctctccctggccaaaggaatcaagtcatcagggaaagtggtgtatttcacagctacg
ttcccctatgtggttctggtcattctgttgttcagaggagtgaccctcccaggggctggt
gacggcatcctctacttcatcacacccaagtgggagaaactcaatgatgctaaggtgtgg
aaggatgctgccacccagatcttcttctctctgtcagcagcctggggaggcctcatcaca
ctgtcttcttacaacaagttccacaacaactgctacagggacaccatcatcgtgtgcata
gttaacagtgccaccagtatattcgctgggttcgtcatcttctccgtcattggattcatg
gcccatgaactgaaggtgcccattgagaaggtggcagatgaaggtccaggcatagcattt
gtggtgtacccggaggctctgaccagacttccactctctccgttctgggccatcatattc
ttcctcatgctgctgaccctcggcttggataccatgtttgccaccattgagaccatagtg
acgtcggtgtcagatgagttcccccagtatctgagaaagaacaagcctctgttcacgctc
atctgctgtgcctgtttcttcttcctgggattccctatggtcacagagaatgggatgtac
atgctccagttggtggacacgtatgctgcctcttactctctggtcatcattgccatctgt
gagctaatcggaatctcctacttctatggcctgcagaggttctgcgaggacattgaaatg
atgattggcttccaaccaaaccgcttctggagaatctgctgggcctttgtgactccaacc
attctgacttcttcttcctgtttttga
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