Oncorhynchus nerka (sockeye salmon): 115112824
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Entry
115112824 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: amyloid-beta A4 protein-like
KO
K04520
amyloid beta A4 protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115112824
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115112824
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
one00535
]
115112824
00536 Glycosaminoglycan binding proteins [BR:
one00536
]
115112824
Peptidases and inhibitors [BR:
one01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
115112824
Proteoglycans [BR:
one00535
]
Cell surface proteoglycans
Others
115112824
Glycosaminoglycan binding proteins [BR:
one00536
]
Heparan sulfate / Heparin
Others
115112824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
Beta-APP
APP_amyloid
Kunitz_BPTI
VSG_B
Motif
Other DBs
NCBI-GeneID:
115112824
NCBI-ProteinID:
XP_029495684
LinkDB
All DBs
Position
LG3:53848229..53905157
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AA seq
754 aa
AA seq
DB search
MGERTAFLLLWVATLTLASEVPSDDSVGLLAEPQVAMFCGKFNMHVNVQSGKWESDPFGT
KSCIGTKEGILQYCQEVYPELQITNVVEANQPVSIQSWCKKGRKKGRKECSSHTHIVVPY
RCLVGEFVSDALLVPDKCKFLHQERMDMCESHLHWHTVAKESCGDRTMNLHDYGMLLPCG
IDRFRGVEFVCCPAETQRESDSVELTESDVWWGGDETEYTDNNMPRQADQGAVTTEEDDE
EDAFDRDEDGDGLEDDDDEDDEDDVTDERDSGEGTSNIAMTTTTTTTTESVEEVVREVCW
ARAESGPCHAILERWYFVPEKGTCAPFLFGGCGGNRNNFDSEEYCLSVCSTSVLPTTAPS
PPGAVDRYLESPGDDSEHANFQQAKESLEAKHRERMSQVMREWEEAERQAKSLPRADKKA
VIQHFQEKVEALEQEAAGERQQLVETHMARVEALLNSRRHMALENYLGSLQANPPRPRQV
LGLLKKYVRAEQKDRQHTLKHYEHVRMVDPKKAAQIRPQVMTHLRVIDERMNQSLGLLYK
VPSVTNEIQDQVSVLMQRVQSELSQQVSSLQSDGRSDGRVSYGNDALMPDQAYSSAPLDP
GMGLDRLGFIHPESFNQPNTDNHVDPVDARPVPDRGLPTRPVSALKPEEVPEVRVEKEER
QSASYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIIISLIMLRKKQYTSIHHGVL
QVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagcgaacggcatttctgctgttatgggttgcgaccttgacgctggcatctgag
gtgccttctgatgactcagtgggtctgctggcagagccccaggtagccatgttctgtggg
aaattcaacatgcatgtcaacgttcagagtggcaagtgggagtcggatcccttcggcacc
aagagctgcatcggaaccaaggagggcatcctgcagtactgtcaggaggtgtaccctgag
ctccagatcactaacgtggtggaagccaaccagccagtcagcattcagagctggtgcaag
aagggacgcaagaagggacgcaaggagtgtagcagtcacacacacatcgtggtgccctac
cgctgcctggttggagagtttgtgagtgatgccctgctggttcctgataagtgcaagttc
ctgcatcaggagagaatggacatgtgtgagagccacctgcactggcacaccgtggctaaa
gagtcctgcggagaccgcaccatgaatctccatgactacgggatgctgttgccatgcggc
atcgaccgtttccgaggggtggagtttgtgtgttgcccagcggagacacagcgcgagtca
gacagtgtggagctgactgagtctgatgtgtggtggggtggagacgagactgaatatacc
gataacaacatgcctcgccaggcggatcagggggctgtcaccactgaggaggatgacgaa
gaggatgcctttgacagagacgaggacggagatggtcttgaggatgatgatgatgaagac
gatgaggatgacgtgaccgatgaacgggacagtggtgaaggcacctccaacatcgccatg
acaaccaccaccacgaccaccactgagtcggttgaggaagttgtcagagaggtgtgttgg
gcgcgtgctgagtcgggcccgtgccatgccattctggagcgttggtacttcgtgccagag
aagggcacctgtgcccccttcctctttggagggtgtgggggcaaccggaataactttgac
tcagaggagtactgcctgtctgtctgcagcaccagtgtgttgcctaccacggccccctcc
ccccctggcgcggtggaccgttacctggagtctcccggagacgacagcgaacacgccaac
ttccagcaggccaaggagagtctggaggccaagcaccgcgagaggatgtctcaggtgatg
agagagtgggaggaagcagagagacaagccaagagtctccctcgcgctgacaagaaggca
gtcatccagcacttccaggagaaggtggaggccctggagcaggaggcagcaggagagagg
cagcagctggtggagacccacatggcccgggtggaggccctgctcaacagccgccgccac
atggccctggagaactacctcggctccctgcaggccaacccacccaggcctcgtcaggtg
cttggcctgttgaagaagtatgtccgtgcagaacagaaggacagacaacacaccctgaaa
cactacgagcacgtccgcatggtggaccccaaaaaggctgctcagatccgaccccaggtg
atgacccacctgcgtgtgattgacgagaggatgaaccaatccctggggctgctctacaag
gtgcccagcgtgaccaatgaaatccaagaccaagtttctgtcctgatgcagagggttcag
tcagagctgtctcagcaagtctcatctctgcagagcgatgggaggagtgatggcagggtg
agctatggaaacgatgccctgatgcccgaccaggcttacagctctgcccctctggaccct
ggcatgggcctggatcgactgggcttcatccacccagagagcttcaatcagcccaacact
gacaaccacgttgatcctgttgatgctcgtccagtcccagatagaggtctgcccactcgg
cctgtgtctgctctgaagcctgaggaggttcctgaggtgcgggtggagaaggaggagcgg
caaagcgccagctatgaagtgcatcatcaaaaactggtgttctttgctgaggatgtgggc
tccaacaagggtgccatcatcggcctgatggtgggcggggttgtcatagcgacagtcatc
atcatctctctgattatgctgaggaagaagcagtatacctccatccaccacggtgtgttg
caggtggatgctgcagtgaccccagaggagcgtcacctgtccaagatgcagcagaatggc
tatgagaaccccacctacaagttcttcgaacagatgcagaactaa
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