Oncorhynchus nerka (sockeye salmon): 115112846
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Entry
115112846 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family B member 10, mitochondrial-like
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115112846
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115112846
Transporters [BR:
one02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
115112846
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_22
AAA_21
AAA_29
Zeta_toxin
AAA_16
ABC_ATPase
AAA
AAA_33
DUF87
APS_kinase
RsgA_GTPase
nSTAND1
AAA_18
nSTAND3
NACHT
AAA_25
DO-GTPase2
AAA_23
Motif
Other DBs
NCBI-GeneID:
115112846
NCBI-ProteinID:
XP_029495712
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Position
LG28:1596894..1603500
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AA seq
452 aa
AA seq
DB search
MQPVSTSCKSQFYVSPSLAAFVLLIVPPMAGLAVIYRRYLHSIIKRTQDSLAEATQLAEE
RISNMRTVCAFGKELTEVAKYTEKANYILHLAKQEAVLLAGFFGVTGLSGNIIILSVLYK
GGLLMATEHITVGKLSSFLMYAFCVGISIAGMSSFYFELMKGCGAGPRLWEVLDRKLEFP
LNEGIVLRPEQLKGNLELKRRCCVSFAYPTRKDAPIFXGSVIAVVGPSGSGKSTLVSLLL
MLYDPYSGVITIDGHDVRDLNPYWLRSHIGTVSQEPALFSCSIAENIAYGAPDFNTVTVQ
EIHRAGQIANAYEFVXGFPEGFDTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEAT
SALDAENEFLVQDALERLMDGRTVLIIAHRLTTIQNADAVAVLGQRCVVECGQHAQLLGN
YQGLFRKLMEKLAFFQEGQKQALKRAENRRVL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccgtgtctacctcatgcaaatctcagttttatgtgtcacccagtttagcagct
tttgtgcttctgatcgtgcctcctatggctggcctggctgtcatatacaggagatacctg
cactccataatcaaacgcacacaggactctctggccgaggccacacagttggcagaagag
cgtatcagcaacatgaggacagtttgtgcgtttggtaaggagctgacagaagtggccaag
tatacagagaaggcaaactacattctccacctggccaaacaggaagctgttttgctggcc
gggttctttggagtgacaggactcagtggcaacatcatcatcctctctgtgctgtataag
ggagggctattgatggccaccgagcacataactgtgggaaagctctcttcattcctcatg
tacgccttctgcgtgggcattagcattgcagggatgagctcgttctactttgagctgatg
aagggttgtggagcagggccacggctgtgggaggtactggacaggaagcttgaattcccc
cttaatgagggtattgtgctgaggccggagcaactgaagggtaatctggagttgaagagg
cgctgctgcgtctcctttgcctacccgacccgcaaagatgcccctatcttcncaggctct
gtcatcgccgtggtaggccccagcggatcgggcaaatccaccctggtctccctgctgctc
atgctctatgacccatactcaggtgtgatcactattgacgggcatgatgtgagagatttg
aatccttattggttgaggagtcacattggaactgttagtcaggaacctgcactcttctcc
tgttccatcgctgagaacattgcctatggagcgcccgactttaacacggtcacagttcag
gaaatccaccgggctggacagatcgccaacgcctacgagtttgtctgaggtttccccgaa
ggctttgacacagtggtgggagagaagggtgttctactgtcaggtggtcaaaaacagaga
attgctattgcaagggctctgctcaagaaccccaagatacttctacttgatgaggctaca
agtgccctggatgcagagaatgagttcctggtccaggatgctctggagcggctcatggat
gggagaacggtgctgatcatcgcccaccgcctcaccaccatccagaacgctgacgccgtg
gcggtgctgggccaacggtgtgtggtggagtgtggtcagcacgcacagctcctcggcaac
taccaaggcctcttcaggaagctgatggagaaactagccttcttccaagaagggcaaaag
caagcgttgaaaagagcagagaacaggagagttctttaa
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