KEGG   Oncorhynchus nerka (sockeye salmon): 115112851
Entry
115112851         CDS       T07952                                 
Name
(RefSeq) splicing factor U2AF 35 kDa subunit-like isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115112851
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:one03041]
    115112851
Spliceosome [BR:one03041]
 Complex A
  U2 snRNP components
   U2 related factors
    115112851
 Complex B
    115112851
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_2
Other DBs
NCBI-GeneID: 115112851
NCBI-ProteinID: XP_029495722
LinkDB
Position
LG3:53916031..53937785
AA seq 233 aa
MHFSNENLGWKFTHFRVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTA
QSADGLSCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLIGNVYLKFRR
EEDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISR
ELRRELYGRRRKKGGGHRSRSRSRERRSRSRDRGRGGGRDHERRRSRERSGRF
NT seq 702 nt   +upstreamnt  +downstreamnt
atgcatttcagcaatgagaatttggggtggaaatttacacatttcagggtgaactgttct
ttctactttaaaattggtgcctgccgacatggtgaccggtgctccagattacataataag
ccaactttcagccagaccattgccctcttgaacatttaccgtaaccctcaaaacactgcc
cagtctgccgatggtttgagctgtgccgtcagtgatgtggagatgcaggagcactacgat
gagttctttgaggaggtcttcacagagatggaggagaagtacggagaggtggaggagatg
aatgtgtgcgacaacctgggagaccatctgattggaaacgtatacctgaagttccgtcgt
gaggaagacgcggagaaggccgtgatggatctgaataaccgttggttcaacggtcaacca
atccacgccgagctctctcccgttacagacttcagagaagcctgctgccgccagtacgag
atgggggagtgcactcgaggaggcttctgtaacttcatgcacctgaaacccatctccagg
gagctgaggagggagctgtacggtcgccgcaggaagaagggagggggccatcgttctcgc
tcccgttccagggaacgccgttctcgctcgagggatagaggcaggggaggcggacgtgac
cacgagagaaggcgttccagagaacgctctggcaggttctaa

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