Oncorhynchus nerka (sockeye salmon): 115112881
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Entry
115112881 CDS
T07952
Name
(RefSeq) tectonin beta-propeller repeat-containing protein 1-like isoform X1
KO
K17988
tectonin beta-propeller repeat-containing protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115112881
03029 Mitochondrial biogenesis [BR:
one03029
]
115112881
Membrane trafficking [BR:
one04131
]
Autophagy
Other autophagy associated proteins
Others
115112881
Mitochondrial biogenesis [BR:
one03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
115112881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hyd_WA
Tectonin
Pex24p
Beta-prop_HVO_0234
Motif
Other DBs
NCBI-GeneID:
115112881
NCBI-ProteinID:
XP_029495768
LinkDB
All DBs
Position
LG28:complement(4147664..4181290)
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AA seq
1221 aa
AA seq
DB search
MPVSLLWAVDVYGRVYSLSTRGQQWEQCRDAVLEFKRVTAVQQCCWGIACDHHIYLNVHS
SDVPIRYQEETFENQRWNPMDNFSDRLLPSDRWQWSNITGLEHQPLDSFFLPSTNWEWEG
DWYIDENFGGEPTEKEGWTYAIDFPATYTKDKKWNSCVRRRRWIRYRRYKATDTWAKIPS
EGHSGPLPDPFNDISCGGWEISEEPRGRLSLWAVSLQGKVWFREGIHHHSPEGDGWEEVS
LPGEVVQISCGPGDLVWAVLWEGQLIVREGITRDCPRGSSWVVVDSPNPEAGAIHVAVGD
NVVWAVTKDNKVWYRRGINSYNPRGSGWIGMIGEMVMINVGLNDQVWGISCEDRAVYFRQ
GVTSSELSGKAWKAVNIPRDGDIRSHSSASSSSLHSAGCFFSGEVRAQSVMSEDSDTKNG
PQRAVLEVGACPSSPPPDPPPVDPDVPKPRIPKVTSDSFISEMLSDRKVKREGATTAVTA
GPSIPEEEASLREADAKSPPLALVLSPSLSGGPGDPQWSNVDLEETQTHLAVGPAGVRGD
AADTCSLSSVATYTLCQEEPYGADEHPLWAWVSGGGCGVDCHSQLNWFNSSTALSSSVQS
MSLSISPAQTAAWRKQIFEQLSERSKREMDNFKHYEQAIEQSQSVWVKKGTMQWWRDWKP
HKWVDVRFALEQFSGPEGNQDGILFLYYNFNEEKKYLHAFINEVTILVPVLNDSKHTFAV
YTAERTKQRWPIRLAAATELEMHDWLALLSVSCCDSRGIQGPPSKQALWSVTCKGDVFVC
EPSPSLEACPYPTPCDQMFWHQVGGHLRLVECNSLGVVWGVGYDHTVWVYTGGYGGGFLQ
GLASSTDNIYTQTDVKCVYIYENQRWNPVTGYTNRGLPTDRYMWSDATGLQECTKANTKP
PSPHWTWVADWTIDYGISGGTDREGWQYAADFPTSYHGHKTLKDFVRRRRWARKCKLTTT
GPWQEVPPIPLSDVTIIPCGAQSIVEPIPLWAISNKGDVLCRLGVTLLTPAGTSWLHVGT
DQPFKSISIGGANQVWAIARDGSAFYRGSVTAQSPSGDCWYHIPSPVRQKLQQVSVGRTS
VYTVDQHGNLWFRQGLTPSCPQGSSWEHISNNVRKVSVGPLDQVWIIADKVQGSHSLSCG
TVCHRLGVQPMEPKGQSWDYGIGGGWDHITVRGNSFEAPRVRMPSLTPSLTASLTDPLRT
HPPRRPLSFRNTEENGNAVRC
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtccctgctgtgggcagtggatgtgtatgggcgtgtgtacagcttgtccacc
agagggcagcagtgggagcagtgtcgtgatgctgtgttagagtttaagagggtgacggcc
gtgcagcagtgttgctggggtatcgcctgtgaccatcacatctacctgaatgtccactct
agtgatgttcccatacgctaccaggaggagacattcgagaaccagcgatggaatcccatg
gataacttctcggatcgcttgttgccgagcgaccgctggcagtggagtaacatcacagga
ctggaacaccaaccccttgacagcttctttcttccctcgaccaactgggagtgggagggg
gactggtacattgacgagaactttggaggagagcccacagagaaagaaggttggacctat
gccatagacttccctgccacctacaccaaagacaagaagtggaactcatgtgtccgtcgc
aggcgatggatccgctacaggaggtacaaggccacagacacctgggccaagatcccatca
gagggtcacagtggtccccttccagacccctttaatgacatcagctgtggaggctgggag
atcagtgaggagcccagggggaggttgtcactgtgggccgtctctctacagggcaaggtg
tggtttcgtgagggtatccaccaccacagcccagagggggatggctgggaggaggtgtct
ctgcctggggaggtggtgcagatcagctgtggtccaggggaccttgtctgggccgtgctc
tgggagggacaactcatcgtcagggagggcatcaccagagactgcccacgaggctcctcc
tgggtagtggtggactctcccaacccagaggccggggccatccacgtagctgtgggggac
aacgtagtctgggctgtcaccaaggacaacaaggtatggtacagacgtggcatcaactcc
tataacccccgtggttcaggctggatcgggatgatcggggagatggtcatgatcaacgtg
ggtctcaacgaccaggtgtggggtatcagctgtgaggaccgagcagtgtatttccgtcag
ggtgtgacctccagtgagttgagtggtaaagcctggaaggctgtcaacataccccgagac
ggagacatcaggtcccactcctccgccagcagtagcagtctgcacagtgctggttgtttc
ttcagtggagaggtgcgagcacagtctgtgatgagtgaagactcagacacaaagaacggt
ccacagagggcagtcctagaagtaggggcctgtccctcctcccctccccccgatccccct
cccgttgaccccgacgtccccaaaccacgcatacccaaggtcaccagcgacagcttcatc
tccgagatgctctctgaccgcaaggtcaaacgggagggggccaccactgccgtcaccgcc
ggtccctctatcccagaagaggaggcctctcttcgggaagcagatgccaagtctccccct
ctggccctggttctgtcccccagcctgtctggagggcctggggacccccaatggagtaac
gtggacctagaagagacccagactcacctggctgtggggcctgctggggtgagaggggac
gcggctgacacctgtagcctgtcctctgtggccacctacaccctgtgtcaggaggagccg
tatggggcggatgaacatccactctgggcatgggtcagtggaggaggctgtggtgtggac
tgtcactcccagctcaactggttcaactcttccacagccctgtcatcttcagtccagtcc
atgagtctgtccatcagtccagcccagacagctgcctggcggaaacagatctttgagcag
ctcagcgaacgctccaagagagagatggacaactttaaacactacgaacaggccatagaa
cagtcccagtctgtgtgggtgaagaaagggaccatgcagtggtggagggactggaagccc
cataagtgggtggacgtgagatttgccctggaacagttctcaggaccagagggaaaccag
gatggcattctcttcctctactacaacttcaacgaggagaagaagtacctgcatgcgttc
atcaacgaggtgactatcttggtgccggtgctgaatgactccaaacacacgtttgccgtc
tacacagcagagaggacaaaacagaggtggcctatcagactggctgctgccaccgagctg
gagatgcacgactggctggccctgctgagtgtgtcgtgctgtgactcccgggggatccag
ggtcccccctctaaacaggccctctggtcagtcacctgtaaaggagacgtcttcgtctgt
gagccttcacctagcctggaggcctgtccctaccccacaccctgcgaccagatgttctgg
catcaggtggggggccacctgcgtctggtggagtgtaacagtctgggggtggtgtggggg
gttggctacgaccacactgtctgggtctacactggcggctatggagggggattcttgcag
ggtctggccagcagcacagataacatctacacccagacagatgtgaagtgtgtctacatt
tatgagaaccagaggtggaacccagtcacaggatataccaacagaggcctcccaacagac
cgttacatgtggagtgatgcaacaggactgcaggagtgtaccaaggccaacaccaagcct
ccatcccctcattggacatgggtggcagactggaccattgactacggtatctctggaggg
acagacagagagggttggcaatatgcagctgatttcccaacgtcgtatcatggccacaag
accttgaaggactttgtccgtcgtaggcgatgggccaggaagtgtaaactgaccaccaca
gggccgtggcaggaagtcccacccatcccgttgagtgacgtgaccatcatcccgtgtgga
gctcagagcattgttgagccgatccctctgtgggccatcagtaacaagggagacgtgctc
tgtagactgggagtcaccctactgacgcctgctgggacgtcatggctccatgtgggcaca
gaccagccctttaagtctatctccattggtggggccaaccaggtgtgggccattgccagg
gatggctctgctttctacaggggctccgtgaccgcacagagcccttcaggagactgctgg
taccacatcccctctccagtcaggcagaagctccaacaggtgtctgtagggaggacgtca
gtctacacagtggatcaacatggtaacctgtggttcagacagggcctgactcctagctgc
ccccagggatcgtcatgggaacacatctctaacaatgtacgcaaggtctccgtaggacct
ctggaccaggtgtggatcatagctgacaaggtgcaaggcagccacagtctgagctgtggg
acagtctgtcaccgtctgggggttcagcccatggagccaaagggacagtcgtgggactat
ggcatcgggggtggctgggaccacatcactgtgagagggaactccttcgaggctccccgt
gtccgtatgccctccctgacaccctcccttaccgcctccctgacggaccccctccgcacc
catccaccccgcagaccgctctccttcaggaacacagaggagaacgggaacgctgtcagg
tgttaa
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