Oncorhynchus nerka (sockeye salmon): 115112922
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Entry
115112922 CDS
T07952
Name
(RefSeq) ran GTPase-activating protein 1-like
KO
K14319
Ran GTPase-activating protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115112922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115112922
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
115112922
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Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
115112922
NCBI-ProteinID:
XP_029495844
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All DBs
Position
LG28:6255981..6262354
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AA seq
562 aa
AA seq
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MASDDIALLAEALSKTHVGYGELSYKGQGLKLDNTESAKELVREIEEYQGLRALRLEGNT
VGVEAAQAIAKALECKDQLQSCHWSDMFTGRLRSEIPTALKSLGSALMTAGARLRELDLS
DNAFGPDGVKGIETLLKSSACHSLQELRLNNCGMGIGGGKILAAALTECHEQSSALGAPL
KLKVFQAGRNRLENEGATALALAFQLMGSLEEVHMPQNGINHAGVTALATAMQHNPHLRI
LNLNDNTFTKRGALAMAQALRHLRTVQVINFGDCLVRSEGAIALSAVLREGLPTLKELNL
SFGEITEAAALVLAQAVQDKPHMEKLDLNGNCLGEEGCEALKETMDNMDRADILASLSDD
EGEPDEDEEEEVEDEENGKEMKENGVKDERESPVKLEPNCHPEILSFLSSPTAETLLKLG
DNRTGLLQQHVDVSDPDKVADAFLRISSLYSDDHEVKKAVLETIDILLKKAFSGSSLQTY
SFLSTLLVMLGLLKGEGKVKKVQVLPGHLLVLEHAVQQDYFPQDHATLLDTFVARHGKAL
KSCSHARDSLKSTLERRLSPEC
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgatgacattgccctgctggccgaggcgctgtccaagactcatgtaggatat
ggagagttgagctacaagggccagggactgaagctggacaacacagagtctgcgaaggag
ttggtgcgggaaatagaggagtaccagggactccgggccctgcggttggagggaaacacc
gtgggagtggaggcagcgcaggctatagccaaagccttggagtgcaaagaccaacttcag
agttgccactggagtgatatgttcacgggtcgcttgcgctcagaaatcccaactgccctg
aagtccctgggcagtgcgttgatgacagcaggggccagacttcgagagcttgacctgagt
gataacgcctttgggccagatggggtaaagggcattgagactctactgaagagctctgcg
tgtcactctctacaggagctgagactcaacaactgtggcatgggcatcggagggggcaag
atcctggcggcagcgttgactgagtgtcatgaacagtccagtgctctcggtgccccactg
aaactgaaagtgttccaagcaggcagaaaccgcttggagaacgaaggagccacagccctt
gccctggcatttcagctgatgggaagcctagaggaggtgcacatgcctcagaatgggatc
aaccatgctggggtgactgctctggccaccgccatgcagcacaacccccacctgcgcatc
ctcaacctcaacgacaacaccttcaccaagagaggggcgctggctatggctcaggctctg
aggcacctgaggactgtgcaggtgatcaactttggggactgcctggtgcgttctgaaggg
gccattgctctctctgctgtcctgagagagggactgcccactcttaaggagctaaatctg
tcctttggggagatcacggaagctgcagcactggtgttggctcaggccgtacaagacaaa
ccccatatggaaaaactggatctcaatggtaactgtttgggggaggaggggtgtgaggct
ctgaaggagaccatggacaacatggacagggctgacatactggcatctctcagtgatgat
gagggagagcctgatgaagatgaggaggaggaggttgaagatgaggagaatggcaaagag
atgaaggagaatggagtgaaggatgaaagagagagcccagtgaagcttgagccaaattgt
catccagagatcctctctttcctcagctcccccaccgctgagacactgctcaaactgggg
gacaacaggactggactcctccagcaacacgtggatgtctctgaccctgataaggttgcc
gatgccttcctgagaatctcctctctgtacagtgatgaccatgaggtcaagaaggctgtc
ctggagactattgacatcctgttgaagaaggcattctctggttcctccctgcagacctac
agcttcctgtccactctactggtgatgctggggctcctcaagggtgagggcaaggtgaag
aaggtgcaggtgttacctggtcacttgttggttttggagcacgctgtccaacaggactac
ttcccccaggaccacgccaccctgctggacacatttgtcgccaggcacggtaaagccctg
aagtcctgcagccatgcccgagatagtctcaagtccacactggagagaaggctctccccg
gaatgctga
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