Oncorhynchus nerka (sockeye salmon): 115112923
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Entry
115112923 CDS
T07952
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 2 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115112923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115112923
03036 Chromosome and associated proteins [BR:
one03036
]
115112923
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
115112923
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
115112923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-FCS_1
THAP
Astro_capsid_p
DUF2457
Motif
Other DBs
NCBI-GeneID:
115112923
NCBI-ProteinID:
XP_029495845
LinkDB
All DBs
Position
LG28:complement(6272410..6305097)
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AA seq
816 aa
AA seq
DB search
MPERCVAYGCGKSWEDGVTLYNFPNNDTEEFHKWEKQVQRTRSNWTASPNSQLCCEHFGK
ECFENKPYPVLKALAAKGQLKLKDGAVPTVFIRPPCTSCEGFGCNVCTPKAQRRGVPVEP
QEYDTEDVEGGPLQSDDTDAEDDDEDDEEDEDEDDEDEMDDSFGDYYSALTIDDGPVVCE
MCGFSGTRDTFYSKTKRFCSVSCSRAYSSNCKKSSILARLQGKPPTKKAKVLIKTAWSTQ
MGNMIASLGSSQDNSSSSTGQDVAATGNFDWGAYLEKAGSLAASVACFRHAPLCAQWDDI
TVRLKVEVLNTSAILPSKVYWIASIIQLAGYKARLRYEGFEEDSSQDFWCSLGSGDMYPI
GWCAMTGKLLVPPQAVHQNISDWKEYLMNRLVGARTLPVDFYMKLAESMKCPFRTGMRVE
VVDRTLVSRTRLAVVDTVTGGRLRLVYEDGEQEAKGEPLSDVWCHMWSPLLHPVGWSSKV
GHVIKLADVDHPTFRKVYCDSVPMLFKKPRTVYMEGGFFEVGMKLEAINPVNLGNICVAT
IHKVLLDGYLMVGIDGTDGPGDGSDWFCYHASSHAILPKGYCQKHNIQLTPPPGYDWKTF
SWAKYLEEKGARTAPAQLFNTDGSGHGFTQKMKLEAVDLMEPWLVCVATVRRCVGRLLLL
HFDGWEPDFDQWVDVQSPDIYPVGWCEVTGYQLQPPIGPDPVASRKKHKPMGKKKKRMVK
KKLANLISKNRPPRRPSQQSEPEAGTPEQSDHTSVTQQIKTEPEEQEIIAVKVEEVETPS
HRPCQRPRSLHPPWGWSSRSHRERTSRKQQTEPWIT
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgctgtgtggcgtatgggtgtggcaagtcgtgggaagatggtgttactctg
tataatttccctaacaatgacacagaggagtttcacaaatgggagaagcaggtccagcgg
actcggagcaactggaccgcctcgccgaactcccagctttgctgtgaacactttggtaag
gagtgttttgaaaacaagccctaccccgtcctcaaggctctcgctgccaaaggacagctg
aagctgaaggatggggctgtccccacagtgttcatacggcccccctgcacctcctgtgag
ggcttcggctgcaacgtgtgcacccccaaagcccagagacgtggcgtccctgtagaacca
caggaatatgacacggaggatgttgaggggggacctctgcagtcggatgacactgatgca
gaggatgacgatgaagatgacgaagaagacgaagatgaagatgatgaagatgagatggat
gattcttttggagattactactctgctctcactatagatgacggaccggtggtgtgtgag
atgtgtggcttcagcgggaccagagacaccttctattccaagaccaagcgtttctgcagc
gtctcctgctccagagcctactcctccaactgcaagaagtcctctatcctggcacgactt
cagggaaagcctcccaccaagaaggccaaggtgctgattaagactgcctggtccacccag
atgggaaacatgattgcttctctgggaagcagtcaggacaacagctccagctctactgga
caggatgttgcagcaacaggaaactttgactggggtgcttacctggagaaggcaggctct
cttgctgcttcagtggcctgcttcagacatgcgccactctgtgcccagtgggatgacatc
acagtgaggttaaaggtagaggtcctgaacactagtgccatcctacccagtaaagtgtat
tggatcgccagcatcatccaacttgcaggctataaagctcggttgaggtacgagggcttt
gaggaggacagcagccaggacttctggtgcagcctgggttctggagacatgtaccccatc
ggatggtgtgccatgaccggcaagctgctggtgccaccacaggctgtgcaccagaacatc
tctgactggaaggagtatctgatgaaccggctggttggagccagaactttgcctgtggac
ttctatatgaagctggccgagagtatgaagtgtccgttccgtactggcatgcgtgtggag
gtggtggaccgcactctggtgagccggacacggctggcagtggtggacactgtgaccgga
ggccgcctaagactggtctatgaggatggggagcaggaggccaaaggggagcccctctct
gatgtctggtgccatatgtggagcccccttctgcacccagtgggctggtccagcaaagtg
ggtcatgtcattaaactggctgacgttgaccacccaacattccgtaaggtgtactgtgat
agcgtccccatgctgtttaagaagcccaggactgtgtacatggaaggaggcttctttgag
gtgggaatgaagctggaggccatcaatcctgtaaacctgggcaacatctgtgtggccact
atacacaaggtgctgttggatggctacctgatggtgggcattgatggcacagatgggccg
ggtgatgggtctgactggttctgctaccatgcttcctcccatgccatcctacccaaggga
tattgccagaagcacaacatccagctcacaccaccccctggctatgactggaaaaccttc
tcctgggcaaaataccttgaggagaagggagccagaacagcgccagcacagctcttcaac
acggacggctcaggtcacggcttcactcagaaaatgaagttggaagctgtggacctgatg
gagccgtggctggtgtgcgtcgccaccgtgaggcgctgtgtgggccggctgctactgctg
cactttgatggctgggagccggactttgaccagtgggtggacgttcagtcaccagacatc
tacccagtgggctggtgcgaagtcacaggataccagctccagccacccattggaccagat
cctgttgcaagtcgcaagaaacacaagcctatggggaaaaagaagaaaagaatggtgaag
aagaaactggcgaacctcatctccaagaaccgccccccaagacgtccgagccaacagtct
gaacctgaggccggaaccccagaacagtcagaccacacatccgtcacacagcagattaag
actgaacctgaggagcaggagatcatagcagtgaaggtggaggaggtggagaccccatcg
caccgaccctgccagaggcccaggtccctccaccctccctgggggtggtcaagcaggagc
cacagggagaggaccagcagaaagcaacagacagagccttggatcacctga
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