Oncorhynchus nerka (sockeye salmon): 115112964
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Entry
115112964 CDS
T07952
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04510
Focal adhesion
one04520
Adherens junction
one04810
Regulation of actin cytoskeleton
one04820
Cytoskeleton in muscle cells
one05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115112964
04520 Adherens junction
115112964
09142 Cell motility
04820 Cytoskeleton in muscle cells
115112964
04810 Regulation of actin cytoskeleton
115112964
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
115112964
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115112964
04147 Exosome [BR:
one04147
]
115112964
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
115112964
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115112964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
SelB_WH_2nd_bact
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
115112964
NCBI-ProteinID:
XP_029495938
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All DBs
Position
LG28:complement(9831210..9916062)
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AA seq
1068 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTGPVAAVQAAVSNLVRVGKD
TVQTTEDQIMKRDMPPAFIKVETACTKLVQAASMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISGIKIFVTTKTSGSQGVEESLKNRNFTFEKMSAE
INEIIRVLQLTSWDEDSWANKKDTEAMKRALALIDSKMTQAKSWLRDPNAQQGDAGEQAI
RQILDEAGKVGELCAGKERRDILGTAKTLGQITDLVSEMRARGQGASPAAMQKAQQVSQG
LDILTGKVENAARKLEAMTNSKQVIAKKIDAAQNWLADPNGGPEGEENIRAILTEAKKIA
DMCEDPKERDDILRSIGEMAALTAKLSELRRQGRGDTPEARALAKQIATALQNLQSKTTK
AVANSRPAKAAVHLEGKIEQAQSWMENPTIDDGGVGQAAIRGLVAEGRRLANALPGPYRQ
ELLGKCEQVEQLMAQLANLAARGEGESPQARAVAQQLQETLKDLKEKMQEAMTHEVSDIF
SDTTTPIKLLAVASTAPSDAPNRDEVFDERAANFENHANKLGATAEKAAAVGTANKTTVE
GIQAAVKSTRDLTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT
KSLLNASEEAIKKDLDKCRVAMANHQPQMLVAGATSIARRANRILLVAKREVENSEDPKF
REIVKAASDELSRTISPMVMDAKAVAGNITDPSLQKGFLDSGYRILGAVAIVRDAFQPQE
PDFPPPPPPDLHQLHVSDEPAPPKPPLPEGEVPPPRPPPPEEKDEDFPEQVLGEMVSEPM
MMAARQLHEEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKAS
DEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQ
ATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLHWIRKTPWYQ
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgccggtttttcacacaaagacgatagaaagtatcctagagccggtggctcagcagata
tcccacctggtgataatgcacgaagaaggtgaagtggacgggaaagctatcccggatctc
accggacccgtggctgcagtgcaggcggctgtcagcaacctggtccgggtggggaaagac
actgtccagactacggaggaccagataatgaagagagatatgcctccagctttcatcaag
gtggagactgcatgcaccaagctggtgcaggcagcatctatgttgaaagcagacccttac
tccgtccccgctcgagattacctcatcgacggctcccggggcatcctctctggcacatcg
gacctgctgctgaccttcgacgaggctgaggttcgtaaaatcattcgcgtctgcaaaggt
atcctggagtacctaaccgtagcagaggtggtggaatctatggaggacctgatcacatac
acaaagaacctgggtccagggatgacaaagatggcaaagatgattgacgagcgacagcag
gagctgacccaccaggaacaccgtgtgatgctggtcaactccatgaacacagtcaaagag
ctgctgcctgtactcatctcaggtatcaagatctttgtgacgaccaagacgtccggcagc
cagggagtagaggagtctttgaagaacaggaacttcaccttcgagaagatgagcgctgag
atcaacgagatcattagggtgctgcagctcacttcctgggacgaagactcctgggccaat
aagaaggatacagaggccatgaagagagctctggcactcatcgactctaagatgacccag
gccaagagctggctgagggatcccaatgcccaacaaggggatgcaggagaacaggccatc
cgtcagatcctggatgaggctgggaaggtgggagagctgtgtgctgggaaggagcggagg
gatatcctgggcactgccaaaactctgggccagatcactgacctggtgtctgagatgagg
gccaggggtcagggagcatctcctgcagccatgcagaaggcccaacaggtctcccagggc
ctggacattctcacgggaaaggtggagaacgcagcccggaaattggaggccatgaccaac
tccaaacaggtcatcgccaagaagatcgatgctgctcagaactggctcgcagaccccaac
ggtggtcctgagggagaggagaacatccgagccatcctgactgaggccaagaagatcgct
gacatgtgtgaagaccccaaggagagagatgacatcctgaggtccatcggagagatggct
gctctcaccgccaagctctctgagctccggagacagggtagaggagatactccggaggcc
agggcattggccaaacagatagccacggctctgcagaacctgcagtcgaagaccaccaag
gctgtagccaacagcaggcctgctaaggcagcagtccacctggaagggaagatagaacag
gcccagagctggatggagaaccctaccattgatgacggtggagtgggccaggcagctatc
cggggtctggtggcggagggtcgtcgtctggctaacgccctgccaggtccctatagacag
gagctgctggggaagtgtgagcaggtagaacagttgatggcccagctagccaacctggcc
gccaggggcgagggagagtcgccacaagcacgtgccgtggctcagcagctccaggagacc
ctgaaggacctcaaagaaaagatgcaggaagctatgactcacgaagtgtcggacatcttc
agcgacacgaccactcccatcaaactactcgctgtggcctccaccgccccgtccgatgcc
cctaacagggacgaggtgtttgacgagagggcggccaactttgagaaccatgccaacaag
ctgggtgccacggcagaaaaggctgccgctgtaggaacagctaacaagaccactgtggag
gggatccaagctgccgtcaagtctacaagggacctgacaccacaggtggtctctgcagcc
cgtatcctgctgagaaacccaggcaaccaggctgcatacgagcactttgagaccatgaag
aaccagtggattgacaacgtggagaaaatgacaggtttggtggacgaggccatagacacc
aagtctctgttgaatgcctctgaggaggccattaagaaagacctggataagtgtcgtgtg
gccatggctaaccaccagccccagatgttagtggcaggggcaactagcatcgcccggcgg
gccaaccggatcctcctggtggcgaaacgggaggtggagaactctgaggatcctaagttc
agggagatagtgaaggctgcatctgatgagctcagccggaccatctctcccatggtgatg
gacgccaaggctgtggctgggaacatcacagatccaagtctgcagaagggcttcctggac
tcaggctatcgaatcctgggtgccgttgccattgtgagagatgccttccagccacaggag
ccagacttcccaccaccaccacctcctgatctgcatcagctgcacgtcagcgacgagccc
gccccacccaaaccccctctccccgagggtgaggttcctccccccagacctcctccccca
gaggagaaggacgaggacttcccagagcaggtattgggagagatggtgagcgagcccatg
atgatggccgccaggcagctccacgaggaggcccgcaagtggtctagcaagggtaacgat
atcatcggtgcagccaagagaatggccctgctcatggctgagatgtcccgtctggtgcgc
ggtggcagtgggaacaagcgtgccctcatccagtgtgccaaagacatcgccaaggcctca
gatgaggtcacaagactggccaaggaggtggccaagcagtgcacagacaaacgcatccgg
actaacctgctccaggtgtgtgagcggatccccaccattagcacacagctcaagatcctc
tccacagtcaaggccaccatgttgggtcgtaccaacatcagtgaagaggagtcagagcag
gccacagagatgttggttcacaatgcccagaacctgatgcagtctgtgaaggagacggta
agagaggctgaggctgcctccatcaagatccggacagatgcaggcttcactctccactgg
atccgtaagacaccctggtaccaataa
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integrated database retrieval system
