Oncorhynchus nerka (sockeye salmon): 115112993
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Entry
115112993 CDS
T07952
Name
(RefSeq) ras-related protein Rab-40B-like
KO
K07928
Ras-related protein Rab-40
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115112993
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
one04031
]
115112993
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
115112993
GTP-binding proteins [BR:
one04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
115112993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
115112993
NCBI-ProteinID:
XP_029496001
LinkDB
All DBs
Position
LG28:11929787..11973674
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AA seq
290 aa
AA seq
DB search
MNHRTSPVKAYDFLLKFLLVGDSDVGKGEILASLQDGASESPYGYNMGIDYKTTTILLDG
RRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDEHAPGVP
KILVGNRLHLAYKRQVTTEQAQVYAERLGVTFFEVSPLCNFNITESFTELARIVLMRHGM
ERLWRPIKVLSLQDLCCRSIVSCTPVHLVDKLPLPLALKSHLKSFSMANGLNARMMHGRS
YSVTTTAANTTHIATKRTGCQLLKKKKLFRPPPLSPAAEQSCTGKSCKIS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacagaaccagccccgtcaaggcttacgattttctgcttaagtttctcctggtg
ggagacagcgatgtgggaaagggggagatactggcgagcctccaggacggagccagcgag
tctccgtatggctacaacatgggaatcgactacaagacgacaacgatactcctagacgga
agaagagtcaagctgcagctctgggacacctctggccaggggcgcttctgcaccatcttc
cgctcttactccagaggagcgcagggtgtgatcttggtctatgacatcaccaaccgatgg
tcgtttgatggtattgacagatggattaaggagatagatgagcatgcaccgggagtgcct
aagatcctggtggggaaccggttacacctggcctacaaacgccaggtgaccacagagcag
gcccaggtgtacgccgagaggttaggggtcaccttctttgaggtcagcccgctgtgcaac
tttaatatcacagagtccttcacagagctggccaggatagtcttaatgaggcatggcatg
gagagactctggaggcctatcaaagttttgagtcttcaggacctgtgctgtcgttccatc
gtgtcctgcacccctgtccaccttgttgacaagcttcctctccccctggctctcaagtcc
cacctcaagtctttctccatggccaacggcctcaatgcccgcatgatgcacggacggtcc
tactccgtcaccaccactgctgccaacaccacccacatcgccaccaagaggaccggatgc
cagctgctgaaaaagaaaaaactcttccgtcctccgccgctcagcccggcggccgaacag
agctgcactggcaagagctgcaagatctcctag
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