Oncorhynchus nerka (sockeye salmon): 115113005
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Entry
115113005 CDS
T07952
Name
(RefSeq) serine/arginine-rich splicing factor 2-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115113005
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115113005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115113005
Spliceosome [BR:
one03041
]
Common components
Common spliceosomal components
SR proteins
115113005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_PARP14_3
RRM_3
RRM_occluded
Nup35_RRM_2
Beta-prop_SCAP
RRM_8
Motif
Other DBs
NCBI-GeneID:
115113005
NCBI-ProteinID:
XP_029496027
LinkDB
All DBs
Position
LG28:12298974..12304340
Genome browser
AA seq
203 aa
AA seq
DB search
MSYGRPPPDVEGMSSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFHDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSHFGRRGGSGPPRRHGGYGRRSR
SRSGSPRRRRHSRSRSRNRSRGRDYSRSRSRSYSRSRSKSRTPRKSKSPSRSRSRSRTPA
SNRGSRSRSKSMPKSPEDTGTES
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgagctacggaaggcctccgcccgatgtcgagggtatgtcctcgctcaaagtggacaat
ctcacgtaccggacctcgcctgagaccctacgccgagttttcgagaagtatggccgggtg
ggagacgtgtacatcccccgcgatcggtacactaaggagagccgtggtttcgcctttgtg
aggttccacgataagcgcgacgctgaagacgcgatggacgccatggacggggccttgctc
gatgggcgggaactgcgagtgcagatggcgcgatatggccgtccaccggactcccacttc
gggcgccgaggcggcagtggacccccaaggaggcatggaggctacgggcgcaggagcaga
agtcgttcaggcagcccccgtcggcgaagacacagtcgttcccgaagcaggaaccgcagt
cgtggccgggactacagccgctcacggtctcgttcctactccagatcccgttccaagtcc
cgcacaccccgcaagagcaagtccccatcccgatcaaggtcccgcagccgcaccccggct
tctaacagaggctcacggtcgaggtccaagagcatgcccaaatcccccgaggacaccgga
accgagtcttag
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integrated database retrieval system
