Oncorhynchus nerka (sockeye salmon): 115113015
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Entry
115113015 CDS
T07952
Symbol
dna2
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease DNA2
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115113015 (dna2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
one03032
]
115113015 (dna2)
Enzymes [BR:
one01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
115113015 (dna2)
DNA replication proteins [BR:
one03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
115113015 (dna2)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
115113015 (dna2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
Dna2_Rift
AAA_30
AAA_19
bpMoxR
nSTAND3
SRP54
UvrD-helicase
DEAD
AAA_25
AAA_22
ResIII
CbiA
MobB
AAA_7
AAA
T2SSE
Motif
Other DBs
NCBI-GeneID:
115113015
NCBI-ProteinID:
XP_029496051
LinkDB
All DBs
Position
LG28:12705003..12735281
Genome browser
AA seq
1409 aa
AA seq
DB search
MQRTKLKKNSVIGGHQKTLSSFFYPNKLKESTPPSKRTICSITEMDSSNVTSNQRSVLGG
IENSPLSFDLLSVPETPDSQIRTSHPARKPEDGHLSPICRRPCSRGVSLIRENSPKAAMF
SLRSKISPPPQVQTSTKNSNMQRCSVKRLFSPDDLQVAKRPKTMPVKRPSISPLRKPLLH
GEEFLSECLQVIGDTQNSKGTKFQQGTGLVVKAVNGRKPSKVGQIHLGYSVLTSGAKEKI
RNVMPSLKPLSVKRASSLSSNESSLPSSLSECEEECAFTVITEQKDATEYIGCPTDLNTS
GGHVISTSFEKPSSVKTILPCPPNPNKSLMEVENSAVRDRGTDGKGVTSENHLEGLEDNW
FDEKMEEIFSKTEEKSNVGKKKGIPDHVILTTGLHNRYWILDVQEIHGAHGSVEKHLSIT
ASKTSHPTEICILKDGWESTPVSMGDVVHLEGQCVSGTWLIDRESGFLVLLPDVLISGTS
IASGIRCMRRAVLGEMFKCFDGGSKQMLNGTIVHDIFQKAAMSGDFSMERLQLLANQALL
SPNYLGDMYTLKLTQEDMKQEIWEYLPALTEWARDYLHTSPQAGKKLLTLKLPSDGALSW
QDSACSIAVTDFVDIEENIWSPRFGLKGKIDVTAGVRIHRKGRPPLNRVMPLELKTGKES
NSIEHRSQVILYTLMSLERRSDAEAGFLLYLKTGNLHPIVGNHMDRRELLKLRNTLAHHV
GNSMEKEGKTRMAPLPGIITDRQACKWCPQIRNCALYDRAIESRAPDYYSSESQQLLVQQ
ESEHLTEAHLLYFSHWLLLCALETHTMERKGGRHNIWLQSAQEREKSGGCMGNMQLIGPV
KNQSDGVYIHRFERRRGGEQGVTGLIVGDRVVVSDHDLQLIGVAAGYVTDVSSTAVSCSL
DRDLSKCSSDVVFRLDQDEGVMGLSTHLVNLSKMMKRSPSSARLRELIVDFHPPQFIDNL
SSVLPREAKDTVANILKGLNKPQKQAMKKVLLSKDYTLIVGMPGTGKTTTICTLVRILHA
CGFSVLLTSYTHSAVDNILLKLRRFKVGFLRLGRAQKVHPDILAYTEERCRTNGIHTLPE
LENLYNKELVVATTCMGVKHPIFSRRRFDFCIVDEASQISQPVCLGPLFYAQRFVLVGDH
QQLPPIVQNREARLLGMDESLFKRLERKSEAVVQLNVQYRMNSKIMSLSNTLMYGGRLEC
GSERTASAMLTLPSQGSVQRELELSLGRPEDLAWVQAALEPLNPVCFLDTTQVPALETVD
QGGISNQTEAALVHGIVRLLLKAGCRASDIGVIAPYRQQLKAISGLLAGPAFSTVEVNTV
DKYQGRDKSVIIVSFVRSHPEGNLGELLKDWRRLNVAITRAKHKLLMVGSAPTLRRYAPL
EKLLNHLTQESMVFQLPPAAHEVLPTMHL
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggaccaagttaaagaagaactctgtaattggaggccatcagaagaccctctct
tcatttttctacccaaacaaactcaaggagtcaacgcctccctcaaagagaactatatgc
agcataactgagatggactcgtcaaatgtcacctctaaccagcgcagtgtcctgggaggc
attgaaaattctcccctgtcttttgacctcttatctgtcccagagacccccgacagccag
atcagaacctctcaccctgccagaaagcctgaagatgggcatctctctcctatctgccgc
agaccgtgctccagaggggtcagcttaataagggaaaattctcccaaggcagctatgttc
tccctgaggagtaagatcagtcccccgcctcaggtacagacgagcaccaagaacagtaac
atgcaacgttgctctgtgaaaagactgttcagtcccgatgacttgcaggttgccaagcgt
cccaaaaccatgccagtaaagaggccctctattagccctttgcggaagcctctccttcac
ggagaggaattcctgagcgaatgcttgcaggtcattggtgacactcaaaactccaaaggt
actaaattccagcagggcacaggcctagttgtcaaagctgtgaatggcagaaagccatcc
aaggttggtcagatacacttaggttacagtgtattgacatcaggtgccaaggagaagatt
agaaacgtcatgccatcattaaagccactgtctgtcaaaagagcttcgtccttgtcctct
aatgagagctctctccccagcagcttgagtgaatgtgaagaggagtgtgcttttacggtc
attacagaacagaaagatgccacagaatatattggctgccctacagacttgaatacaagc
ggtgggcatgtgatctctactagctttgagaagcctagtagtgtaaaaactatccttccg
tgtccacccaatcccaataagagcttaatggaagttgaaaacagtgctgtcagagaccgt
ggcactgatgggaaaggagtaacatcagaaaaccacctggaggggctggaggacaactgg
tttgatgagaaaatggaggagatcttcagtaaaactgaggagaaatccaatgttggtaaa
aagaaaggcatcccagaccacgttattctgaccactgggctgcacaaccgctactggata
ctagatgtgcaggagatccatggtgctcatggctctgtggagaaacatctgtccatcact
gcctccaagacctcccaccctactgagatttgtattctgaaggatggatgggagtcgaca
ccagtgtccatgggtgatgtggttcacctggagggccaatgtgtctcaggtacctggctg
atagacagggagtcaggattcttggtgcttctccctgacgtgctcatatctggcactagc
atcgccagcgggatccgctgtatgagacgggccgtgctgggggaaatgttcaagtgtttc
gacggaggctccaaacagatgctgaacggtacgatagttcatgacatcttccagaaagct
gcaatgtctggagacttctctatggaaaggctgcaactgctggccaaccaagccctgctc
agccccaactacctgggagacatgtacaccctgaaactgactcaggaggacatgaagcag
gagatttgggagtacctgcctgcactgacagaatgggccagagattaccttcacacctct
ccacaggcaggcaagaaactgttaactctcaaattgccaagtgatggggcactgagctgg
caggactccgcatgcagcattgctgtcacagattttgtggacattgaggaaaacatttgg
tcgccacgtttcggcctgaagggtaaaattgacgtgacagcaggggtgcgtattcatcgc
aagggcaggcctccactcaacagggtaatgcctttggagctgaagactggcaaagagtcc
aactccattgaacaccgcagccaggtcatcctttacactctgatgagcttagagagacgc
agtgatgcagaggcaggattcctgctctacctgaagactggcaacctgcatcctatagtc
gggaaccacatggacagaagagagctgttgaaattaaggaacaccctggcgcatcacgtt
ggcaatagtatggagaaggaaggcaagacacggatggcacctctaccagggatcatcaca
gacagacaggcctgcaagtggtgtccccagatcaggaactgtgctctctatgacagggcc
attgagagcagggctccagactactactccagtgagtcacagcagttgttggtgcagcag
gagagtgagcacctgacagaggcacacctgctctacttcagccactggctgctcctctgt
gccctggagacccacaccatggagaggaagggaggccggcacaacatctggctgcagtct
gcccaagagagggagaagagtggggggtgtatgggaaacatgcagctgattggcccagtg
aagaaccagtcagacggtgtgtatatccaccgttttgagcgccgtcgtggtggggaacag
ggtgtgacgggcttgattgttggcgacagagttgtggtgagcgaccatgatttgcagcta
attggtgtggcagctggatacgtcacagacgtgagcagcactgcagtaagctgctccctg
gatcgggacctttcgaagtgttcttctgatgttgtgttccgactggaccaggacgaaggg
gtaatgggattgagcacccatctggtcaacctctccaagatgatgaaaaggtctccttca
agtgcaagactaagggagctgatagtggatttccaccctcctcagttcattgacaacctc
agcagtgtgttgcccagggaagctaaggacacagtcgccaacatcctgaaagggctcaac
aaacctcagaaacaggccatgaagaaggttttgctctccaaagattatacgctcatagtt
gggatgcctggcactgggaaaaccaccactatatgtacactggtgcgtattctccatgca
tgtggcttcagtgtgctgctgaccagctacacccactctgctgtggacaacatcctgcta
aagctccggaggttcaaggtgggcttcctgcgtctgggccgggctcagaaggtccaccca
gacatcctggcctacacagaggagaggtgtcggaccaacggcatccacacactccctgag
ctggagaatctttacaacaaggagctggtggtggccaccacgtgcatgggtgtaaagcac
cccattttctcccgtcgtcgttttgacttttgcattgtggacgaggcgtcccagatcagt
cagccagtgtgccttgggcccctgttctatgcccagcgctttgtcctggtgggggaccac
caacagctgccccccattgtccagaacagagaggctaggttgttgggtatggacgagagt
ctattcaagcgtctcgagcgtaaaagtgaggctgtagtccagctgaacgtccagtacagg
atgaatagtaaaatcatgtccctaagtaacactctgatgtacggagggaggctggagtgt
ggctcagagaggacggccagcgccatgctgaccctgccctcccagggctctgtccagagg
gagctggagctgagtctgggccggccggaggacctggcttgggtccaggcagctctggag
cctctcaaccctgtctgcttcctggacaccacccaggttccagccctggagactgttgac
caggggggaatcagcaaccagacagaagctgctctggtgcacggcatagtcaggctgcta
ttgaaggctgggtgcagggccagtgacatcggggtcattgctccctacagacaacaactg
aaggccatctcaggcctactagccgggccagccttcagcactgtggaggtcaacactgtg
gacaagtaccagggccgcgacaagagcgtcatcatcgtttcctttgtcaggagtcaccca
gaaggcaatctgggtgagctgctgaaggactggaggaggctgaatgtggccatcacgaga
gctaaacataagctcctcatggtgggctcggcccccaccctgcgccgctacgcccccctg
gaaaaactcctcaaccacctcacacaggagagcatggtcttccagctccctccagcagcc
catgaggtattacccaccatgcacctgtga
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