Oncorhynchus nerka (sockeye salmon): 115113025
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Entry
115113025 CDS
T07952
Name
(RefSeq) chitin synthase chs-2-like isoform X1
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00520
Amino sugar and nucleotide sugar metabolism
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
115113025
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115113025
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
115113025
Glycosyltransferases [BR:
one01003
]
Polysaccharide
Structural polysaccharide
115113025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chitin_synth_2
Glyco_trans_2_3
Glyco_tranf_2_3
Glycos_transf_2
Motif
Other DBs
NCBI-GeneID:
115113025
NCBI-ProteinID:
XP_029496069
LinkDB
All DBs
Position
LG28:13064978..13081611
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AA seq
1436 aa
AA seq
DB search
MEELKFRGRKREGRHRDTWDPFQLNPIGAEKEEKRRCFELFQHLVAGFVGIMVLSSAVIS
KGSLLVLSTLSSPTSTRTPKERQYYVLMLVCSLVVPNLLVFLKSLWKCAFKNFVPPNMRT
MGIVCGIECLVSLGTSILVLVVMPQFDVLTNLFISGGVCMLSSVLQIVFRLQRENWKIIF
PICSLMLVLTGYFLLGADYYVRVSSFVSGQEDDCYWYVGIAVFASFLVSLTWWENPVQAS
NNMQEMLTELDTFRDFVFVISSLLRIVVIAAVYLIYHVLIQENIVWSDFDFTAKADDDEN
TIARHRETLDIGLILLFLQAFFSAACHWFGVVACKIHSVRMSFAFPVCFTGPAVLILGMI
LFLTQSEDLAGADTTSITDFCSSLVELSTKNTSTVVMLEITKSICRTSLSSHYWTWPFSL
LALEGICMWLGLITCTYYVWNFRVQRIERTTELFVRRLYESAFIDLSLLLNTKMKVVRTR
NQESSVVDDVENCVIYLCATMWHETYDEMLKILTSMFRLDRYRGDPKEEHKDVFDFECHI
FVDDAFMIEKETGKKFVNEYVTDLIHVVIEVYRVFTNKEPDDVSIIETPYGGRLMFVMPE
GNMLYFHLKDKQLIRNKKRWSQIMYLYYLLGWKGYIVKNPQKITRQNNPCRASLISLDGE
SFLLPQHDNDSKRKHISDDNTYIMALDGDTDFHPAALILLVDRLRKYGNVGAACGRIHPT
GMGPMVWYQKFEYAVGHWLQKTAEHVFGSVLCSPGCFSLFRGSALMDDNVLKRYTTTATR
ASEYVQYDQGEDRWLCTLLLQQGWRVEYNAASDAYTNSPQEFKEFYNQRRRWGPSTLANT
LDLLHSGNETVKRNSSISRLYIFYQIFTVSSSILGPASVSLMIAGAFQFVFQIEGTLSII
IAVIPPIFYMLICFLAKPNAQIIIAAIMSVLYAFLMLASFFAIIGDMAMQGTFITPTGLF
LVSMAVMYLVTAILHPQEFSMIIYGLMYFICIPSGYLLLTIYSLVNMHIVTWGTRETNKE
KEEKMTQNVLCDHNCKLCCWDMKLQVTQETDNLLLQQLQQAVNPNTQVTEQVVKEQQANT
KKEINNAPNEENNKGILSKSSDSKLAKKDSDSKSDTSSDDSVDSIPKKESAYSSIEDDNE
DDDNMLYDGSLYSGFTEEEREILPQSDWVQPVKEEFLKKLTYANMKRNLQEQIRYTLRNK
NQEDVCEELVMMLTDTVNGELKDKVGPEDVLSDSQLEELQYALNEAARRILKTNRMERLE
RRVKRAIEKTLIAPQVEKLTEEEHDFWKKLLERYLAPIVDDKAHKEEVTRELKSLRNKAV
FLYFIVNVLWIVATFFLQAIGNDVISIKIEKIWPNGTSSGEYLKVEPLSLMFLLSFAVLL
VVQFLAMLYHRVYTLIHVVSYRSTEKDYIPRDEEDEEGLILENQIANGLVITSDDL
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctcaaattcagagggcggaaaagggaagggagacacagggacacctgggat
ccattccagttgaatcccattggtgctgagaaagaggagaagagaagatgctttgagttg
ttccagcacctggtggcagggttcgtggggataatggtcctgtccagtgctgtcatcagc
aagggctctctgctcgttctatccacgctctcaagccccacatcaactaggactcccaag
gaaagacaatactacgtgctcatgctggtgtgctctttggtggtgcccaacctgctcgtg
ttcctcaagtcactgtggaaatgcgctttcaagaactttgttcctccaaacatgagaact
atgggaattgtgtgtggcattgaatgcttggtgtctcttgggacctccatcctggtgctg
gtagtgatgccccagtttgatgtactcacaaacctgttcatctctgggggagtctgcatg
ctttcctctgtcctacagatagtatttcgcctgcagagagagaactggaagatcatcttc
cccatttgttctcttatgcttgtcctgactggctactttctccttggggcagactattat
gttcgagtatcctcttttgtatcaggccaggaagatgactgttattggtatgttggcatt
gcagtttttgcatcctttttggtttctctgacctggtgggaaaacccagtgcaggcgagc
aacaacatgcaagaaatgctgactgagttggacaccttcagagactttgtgtttgtgata
tccagcctcttaaggatagtagtcattgctgctgtgtacctcatctaccacgtgttgata
caggaaaacattgtatggtcagattttgatttcactgctaaggcagatgacgatgaaaat
acaattgcaaggcatagagagacacttgatattggtcttattctccttttcctccaagcc
tttttctctgctgcatgccattggtttggggtggtggcttgtaagatccactctgtgcga
atgagcttcgccttccctgtctgcttcactgggcctgccgttcttatcctcggcatgatc
cttttcctaacgcaatctgaagacctagctggagccgacacaacttctatcacagacttt
tgctcgagcctagttgaactaagcacaaagaacactagcacagttgtgatgctggagatc
accaagagcatctgcaggacttctttgagcagccattactggacctggcctttctcccta
cttgcgctggaggggatttgcatgtggctcgggctcatcacatgcacctactacgtgtgg
aacttcagggtccagaggatcgagcgcacaactgagctgtttgtgcgacgcctatacgag
tctgccttcatcgacctgtctctgcttctgaacaccaagatgaaggttgtacgaacgagg
aaccaagagagtagtgttgttgatgacgtggaaaattgtgtcatttacctctgtgcaaca
atgtggcatgagacctatgatgagatgttgaagatcctgacatccatgttcaggttggac
cggtacagaggtgacccaaaagaggaacataaagatgtttttgactttgaatgccacata
tttgtagatgacgcattcatgatagaaaaggagacaggcaaaaagtttgtcaacgaatat
gtgaccgatctcattcatgtggtcatagaggtatacagggtattcaccaataaggagcct
gatgatgtgtcaattattgagactccatatggtgggcgattaatgtttgtgatgccagag
ggaaacatgctgtattttcatctgaaagacaaacagctgatccgaaacaagaagagatgg
tcacagatcatgtacctgtactatctgcttgggtggaaaggatacattgtcaagaatcct
caaaagataacgagacagaataatccttgccgtgccagtctaatatcattggatggggag
agtttcctgttgccacagcatgacaatgacagtaagagaaaacacatatctgatgacaat
acctacatcatggctctggatggggatacagacttccaccccgcagctctgatcttactg
gtggatcgacttcgaaagtatggcaatgtgggtgctgcatgcggaagaatacatccaaca
ggaatgggtccaatggtgtggtatcagaaatttgagtacgctgttggtcactggctccag
aaaacagctgagcacgtttttggttcagtcctctgcagtcctggatgcttcagcttgttc
aggggatcagctctgatggatgacaatgtgctcaagagatataccaccactgcaactaga
gcctctgagtacgttcaatatgatcaaggtgaggaccgctggctgtgcaccctgctcctc
cagcagggctggagagtggagtacaacgctgcgtcagacgcctacacaaactcccctcag
gagttcaaagagttctataaccagaggcgtcgctgggggccctccactctagccaacacc
ctggacctcctgcacagcggcaatgagacagtcaagaggaactcttctatctccaggctc
tacatcttctaccagatattcactgtcagctcctccattcttggccctgcatccgtttct
ctgatgatagcaggtgctttccagtttgtgttccaaattgaaggaaccctgtccataatc
atagcagtcatcccacctattttctacatgttaatttgctttttggcaaaaccaaacgcc
cagatcatcattgcagccattatgagtgtgttatatgcctttctgatgttagcatcattc
ttcgccatcatcggtgacatggctatgcagggcacatttatcaccccaactggcctcttc
ctggtgtcaatggctgtcatgtacctggtaactgccatccttcatccccaggagttcagc
atgatcatctatggtctgatgtacttcatctgtatccccagtggttatctcttgctcaca
atctactcgctggtgaacatgcacattgtcacatggggcacccgagagacaaacaaggaa
aaagaagaaaagatgacccagaatgttctctgtgatcacaactgcaaactctgctgttgg
gatatgaaactacaagttactcaagagaccgataacttgctactccagcaactccagcag
gcagtcaatccaaacacgcaagtcaccgaacaggtggtgaaagaacaacaggccaacact
aagaaagagataaataatgcaccgaatgaagaaaacaacaagggaatactttcaaagtct
tcagacagcaaattggccaagaaagacagcgactcaaaatctgatacaagcagtgatgac
agtgttgacagcattcctaaaaaggagagtgcttattccagcattgaagatgacaatgaa
gatgatgataatatgctttatgatggttcgctttatagtggcttcaccgaggaagaaaga
gaaatactacctcaaagtgattgggttcagcctgtcaaggaagagttcctgaagaaattg
acctacgccaacatgaaaaggaaccttcaggagcagatccgctacaccctgaggaacaag
aaccaggaagatgtgtgtgaagagctggtgatgatgctaaccgacacggtgaacggagag
ctgaaggacaaggtgggaccagaggacgtgctgagcgacagccagctagaagagctgcag
tacgcccttaacgaggccgccaggaggatcctaaaaaccaaccgcatggagaggctggag
aggagggtgaaaagagccatagagaagaccctcattgccccacaggtggagaaactgacc
gaggaagaacatgacttttggaagaaactgcttgagagataccttgcaccaattgttgat
gataaagcacataaagaggaagtgacaagggaactgaagtcactacggaacaaggcagtg
tttctgtatttcatcgtcaacgttttgtggattgtggccaccttctttttacaagccatt
ggaaatgatgtgattagtatcaagattgaaaaaatctggccaaatggcacatcatctgga
gaatacctgaaggtggagcctcttagtctgatgttcctcttgtcatttgctgtgcttcta
gtggtgcagttcctggctatgctttaccacagagtatatactcttatccatgtagtgtcg
tacagaagcacagaaaaagactacattcccagagatgaggaggacgaggaggggctgatt
cttgagaaccagatagccaatggccttgtgatcaccagtgatgacttgtga
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integrated database retrieval system
