Oncorhynchus nerka (sockeye salmon): 115113055
Help
Entry
115113055 CDS
T07952
Name
(RefSeq) exportin-5-like isoform X1
KO
K14289
exportin-5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115113055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
one03016
]
115113055
03036 Chromosome and associated proteins [BR:
one03036
]
115113055
Transfer RNA biogenesis [BR:
one03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
115113055
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
115113055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
115113055
NCBI-ProteinID:
XP_029496122
LinkDB
All DBs
Position
LG28:15153050..15178665
Genome browser
AA seq
1223 aa
AA seq
DB search
MMGEPVADMCDQLVKAVNVMMDAESSQIYRLEALKFCEEFKEKCSFCVPCGLQLADKTQT
AVVRHFGLQILEHVIKFRWNNMPQQEKVQLKNCAMGLLSTGTYPILEEESHIKDVLSRII
VEMIKREWPQHWPDMLKEMEALTSVGEAQTELVMLILLRLAEDVITFRTLPTQRRRDIQQ
TLTQNMESIFSFLLAILQLHVDEYRKLKRIPGQELQAKAHCRVGVATLNTLAGYIDWVAL
ANITNDNCRLLEMLCLLLSETELQLEAAECLLIAISRKGKLEDRKPLMVLFDDVAMHYIL
SAAQSADGAAICNKSSPTQPVGAGVVERHYTFLKRLCQVLCALGSQLCSLVGSDVEVEVP
ANLSKYTEAFLAFTTHPSQFLRSSTQITWGTLFRHEILSKDPVIIQMTIKYFRATMTNLV
KTGFPSSNDSPSCEYSRHDFDSDEDFNSFFNSFRAQQGEVVRNACRIVPLEAFQIAAEWL
QYQISAPIDIGTTVSKTAEGLCSILSPSVVQWDAMTFFTESVVGKIFKNVEDEKLPVDQG
IELLQAVLNYNTQDPLILSCVLTNVSVLFPFVTHRPHFLPQVLYKLFASITFEVVEESKA
PRTRAVKNIRRHACSSIIKMSRDYPQFILPCFDMMYNHVKKLFSSEALLNMLEKCALMEA
LVLISNQFKDYNKQKHFLEELMATVVARWTSDEMRRVLWDPALFLDFVGADQLVAEGTEH
TTGINRSRLSFCVYTILGVVKRARWPADLEEAKAGGFVVGYTPNGAPIYRNPCSAQVLAL
LPNLLVLIRTHNSLFLPENMCRLSETFSKAYDMIEVEKNMVLGLPQPALDIYDPPVYKTH
LERMQGFFCTLYDNCYHILGKAGLSLQQDFYTIEGLAEQIVGSVFVSLDNVPDHRLRTML
RVFLKQLVVSCPQECYNSLLCPLLGPLFAYMLQRLNLRWQIINQRSTVSGEEEEDESCEE
NQEMLEEQLVRLLTREVLDLLTHACIMKKVSAPAGNKEDVDEEEMMSTESQAVAVSPAQP
TGELTELGKCFLKHEDIYMTLLTISFTSLSWKDTSNCHRSASIVCWTLLRQVVGGNLLPE
AVTWFYTSVLKGLQMHGQHEICNSALTQLALLMYENLRPRYMELRDVMTQIPDINLEALD
QYDQRLLEPSSAQRLGEKKRKDQFKKLIAGAVGKALAQQFKKEVHIRNLPSLFKKPKPEK
RDILETSESGALAALFSPVLEDI
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtgaaccggtggctgatatgtgtgatcagcttgttaaagctgtgaacgtgatg
atggacgcggaatctagccaaatatatcgcttggaggccctaaagttttgtgaagaattc
aaagagaaatgttccttctgtgtcccatgtgggctacagttggcagataaaactcaaaca
gcagtggtgaggcactttggtctacagatactggagcacgtcatcaagttcagatggaac
aacatgccacagcaagagaaagtccagctgaagaactgtgctatggggctattgtcaact
ggcacatatcctatcctggaggaggagagccacatcaaggacgttctctcgcggatcata
gtggagatgatcaagagagaatggcctcagcactggcctgacatgctgaaggagatggag
gcactcaccagtgtaggggaggctcagacagagctggtgatgttgatcctgctgcggctg
gcggaggacgtgatcaccttccggaccttgcccacccagcgccgccgggacatccagcag
accctcacccagaacatggagagtatctttagcttcctgctcgccatcctgcagctccac
gtcgacgagtaccgcaaactgaaaagaatacctggccaagaattgcaggccaaggcccac
tgtcgggtaggcgtggccactctaaacaccctggcaggctacatagactgggttgccctg
gcaaacatcaccaatgacaactgtcgcctgctggaaatgctgtgtctgttgctcagtgag
acagagctgcagctggaggctgcagagtgcctgctcatcgccattagccgcaaggggaag
ctggaggacaggaaaccactcatggtgctgtttgatgacgttgccatgcactacatcctc
tctgctgcacagtctgcagatggagcagcaatatgcaacaaatcctctccaacacagcca
gtgggggcgggggtggtggagagacactacaccttcctgaagaggctatgtcaggtcctg
tgtgccctgggcagccaactctgctcattagtgggttcagatgtggaagtagaggtacca
gcaaaccttagcaagtacacagaagcattcctggccttcaccacacacccaagccagttc
cttaggtcttccacccagatcacatggggaactttgttcagacatgagatactctccaag
gatcctgtcatcatccagatgaccatcaagtactttagagccaccatgaccaacctagtc
aagactggtttcccttccagcaacgacagtcccagctgtgagtactcccgtcatgacttc
gacagtgatgaagacttcaactccttcttcaactcgttccgggcgcagcagggggaggtg
gtccggaatgcgtgtcgtattgtccccttggaggccttccagattgcagcagagtggctg
cagtatcagatcagtgcgcccatcgatatcggaaccactgtgtctaagacggctgagggg
ctgtgttctatcctgtctccgtcagtggtccagtgggatgctatgaccttctttacagag
agtgttgtgggaaagatctttaagaacgtggaggatgagaagttgccggtagaccagggc
attgagctgctacaggctgtgttgaactacaacacccaagaccctctcatcctgtcctgt
gtcctcaccaacgtctccgtcctcttccccttcgtcacacaccgacctcacttcctgcct
caggtcctctacaagctatttgcctccatcacattcgaggtggtagaggagagtaaggca
ccacggacgcgtgcggtgaagaacatcagaagacacgcctgctcctccatcatcaagatg
tctcgagactacccacaattcattcttccgtgttttgacatgatgtataaccacgtgaag
aagctgttctccagcgaggctctgttgaacatgctggagaagtgtgctcttatggaggcc
ctggtcctcatcagtaaccagttcaaagactacaacaagcagaaacacttcctggaggag
ctcatggccactgtagtcgctcgctggacctccgacgagatgaggcgtgtgctgtgggat
cctgctctgttcctggacttcgttggtgctgatcagctggtggctgaaggcacagaacac
acaacgggcatcaacaggtcacggttgagtttctgtgtgtacaccatcctgggggtggtg
aagagggcccgctggccggctgacctggaggaggcgaaggcagggggcttcgtagtgggc
tacacccctaatggagcccccatctacagaaacccctgcagcgcccaggtcctggcactg
ctgcccaacctgctcgtcctcatcagaacccacaacagtctcttcctgccggagaacatg
tgtcgtctgagtgagacgttctccaaggcctacgacatgatagaggtggagaagaacatg
gttctaggcctgcctcagccagccctggacatctatgaccctccagtgtataagactcat
ctagagcgcatgcagggattcttctgtactctctacgacaactgttaccatatcctgggg
aaggcaggcctatcattgcagcaggacttctacaccattgagggattggctgaacagatc
gttggttctgtctttgtctccctcgacaacgtgcctgaccacagactccgcaccatgctc
cgggtgttcctgaagcagctggtggtgtcatgtcctcaggagtgctacaacagtctgctc
tgccccctgctggggcctctgttcgcctacatgctacagagactcaatctcaggtggcag
atcatcaaccagaggagtactgtcagtggggaggaggaggaggacgagtcgtgtgaggag
aatcaggagatgctggaggagcagctagttcggctgctcacgagagaggttctggacctg
ctcactcacgcctgcataatgaaaaaggtgtctgcgccagcaggaaacaaggaagatgtg
gatgaggaggagatgatgtccactgagtcccaggcagtcgccgtctcccctgcccagcca
acaggcgaactgacggagctggggaagtgttttctcaaacacgaggacatctatatgacc
ttgttgaccatctcattcacctctctgtcctggaaggacaccagtaactgtcaccgcagc
gcctccatcgtgtgctggaccctgctacgacaggttgtaggtgggaaccttttgccagag
gcggtcacatggttctataccagtgttctgaagggactgcagatgcatgggcagcatgag
atctgcaactcagccctcacacaactggccctgcttatgtacgagaacctgcggccgcgg
tacatggagctaagagacgtgatgactcagatccccgacatcaatctggaggctctagac
cagtacgaccagcggttgctggagcccagctccgctcagaggttgggagagaagaagagg
aaagaccagttcaagaagctcattgctggcgctgtggggaaagctctggcccagcagttc
aaaaaggaggtacatatccgaaatcttccgtctctctttaagaagccgaagcctgagaaa
agggacattctggagaccagtgagagtggagcactagcagcactcttctccccagtgctg
gaggacatctag
DBGET
integrated database retrieval system
