Oncorhynchus nerka (sockeye salmon): 115113138
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Entry
115113138 CDS
T07952
Symbol
anapc1
Name
(RefSeq) anaphase-promoting complex subunit 1 isoform X1
KO
K03348
anaphase-promoting complex subunit 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04110
Cell cycle
one04114
Oocyte meiosis
one04120
Ubiquitin mediated proteolysis
one04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115113138 (anapc1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115113138 (anapc1)
04114 Oocyte meiosis
115113138 (anapc1)
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
115113138 (anapc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115113138 (anapc1)
03036 Chromosome and associated proteins [BR:
one03036
]
115113138 (anapc1)
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
115113138 (anapc1)
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
115113138 (anapc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Apc1_MidN
APC1_C
APC1_3rd
ANAPC1
PC_rep
Motif
Other DBs
NCBI-GeneID:
115113138
NCBI-ProteinID:
XP_029496288
LinkDB
All DBs
Position
LG28:20547415..20605168
Genome browser
AA seq
1950 aa
AA seq
DB search
MSNVYEERATMIAAGELQSFGPFGREHCKNHPNAVNLQLRQLQPASELWASDGAAGLVGS
LQEVTLQEKKRECWLLRKGSSVDSDEMEYDEELYAAGNMVIWSKGSKSQASHVYKAFTVD
SPVQQALWCNFGIPQKKKDEQEILEKTVCIVQSSCVNVHSVTGKDFISPLPFQVSNLWPT
KFGLLLERKNSAPDASQSPPREPLPTVFSMLHPLDEIAPVVCRPTGLFEAAHVQYVSDST
MKIVFSNCEPSIVMTYDTVQCIHSVWALRKVTPDEQSTVLKCPEQVDTPQGLMPPSFLTT
HLRNVSRMDSPGSPFHCHALHNQNRMTSSPGLHSRTHSPSISSMAALSRSHSPGMAAPSF
SVAARFNMSYHSSSPRGHSFLPSPNSTANESVLVPEMEPIVPDLCIEQLWSETASSHREM
SCQASKVFITSDLCENKYLCFLVESHQQLRCVKFIESNNPSQLIFASVATIPAKDAAPLQ
DIDAMLVLEANGSLVLYTGVTRVSKVFVPGLLSPTFSLSNHVTHLSTPMDSVSTPAKATG
RHIGRLEEVAMPSPVSELRGSTKHHETSWLGDYTFQQSVPYIHALRDPVSSRVTLELSNG
TMLRITIPEIATSEMVRKCLQAVRFILPKETAMKVLIKWYNIYNAPGGPSAHLEWNLFVT
CFMTLMGYNTERLGWTRNLHFEVPLSPVIAPKKARPSDTGSDEDWDYMWCSDYHRQVVFR
HGCGAVSLESTDTSGCEESLSSTPALHLDPSAPLFPHIPALFYVLHLLYEELKLDELQRS
GGRSLVGLLQQLARDLQLEEYIDLYWRDYPSFITTFKESCIIDPAQMEQMQRPSFLRAEP
PCVFSWLSSCLRGEEVAPFPYLPGICERTKLLVLSYALYIIGDDNATSVDVSKYLAKLSA
GQKKTVIESALRRPSCMKPDAPNESLAVKLVVWLTSEGFTLKDLESVPFGVALPIRDAIY
QCREQPCSDWSEDVCLLIGRQDLTKQAHKVTVAKGKAVSTVGLGLMLEAPATTEAEEEED
GMTDLNQDVISLIWSQDLRVHEARRLLQSSRPVRVSVVHLPEVSDHEYIEEKENKLLQLC
QRTMALPVGRGLFTLFSYHPVPTEPLPVPKLNLTGRAPPQNTMVDLNSGNIDVPPNMTSW
SSFHNGVAAGLKIAPASQVDSAWIAYNKPKSPELANEYAGFLMALGLNGHLTKLATLNIH
DYLTKGHEMTSIGLLLGVSAAKLSTMDMSITRLLSIHIPALLPPTSTELDVPHNVQVAAV
VGIGLVYQGTGHRHNAEVLLAEIGRPPGPEMEYCTDRESYSLAAGLALGMVCLGHGSNLI
GMSDLNVPEQLYQYMVGGHRRTHAGINREKHKSPSYQIKEGDTINVDVTCPGATLALAMI
YLKTNNRSIADWLKAPDTMFLLDFIKPEFLLLRTLARCIIMWDEILPNSEWVSSNVPQII
QENIGNPVVSEDLNMETLAQAHDYIIAGACMAVGFRFAGSANSDAFDCLYKFARSFMQCL
TSATATVTGHYNLQTCLSMVLLALSMVMAGSGNLKVLQLCRFLHKRTSGEMNYGFHMAHH
MALGLLFLGGGRYTLSTSNSAIAALLCALYPHFPAHSTDNRYHLQALRHLGVLAAEPRLL
VPVDVDTLKPCYALLDVTYKETPWYEETTVELMAPTMLPELQLLKKVKVKGPRYWELSID
MSKGTQHLESILSRDGVLYVKLRAGQLPYKDDPRGWKSLLAPNVNNRNSEVRTFKPEAIS
TFTSDAALVSFAEYFCKSSESVKHKRDTLALFSAILYECVTQENPEMLPTYIAIDQAVRT
LEQTEMCETFALWQMRLVLELCESRVLQHRLREGAQGRGLLLSSEFLPVMKNSADGTLDR
WLTDNSHVLRSYMSGQSLTEDMLSNMLACFLVYHSIPCLSKLSATHLEGSTSFPELLLKF
SQLGIPVRALLRLGPLLLGTAGFWTGQLAC
NT seq
5853 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgtctatgaagagagagccacaatgatagccgcaggggaattgcagtcgttt
ggcccatttggccgtgagcactgcaagaaccacccaaacgctgtgaacctgcagctccgg
cagttgcagccagcctctgagctatgggcctcagatggagcagccggtctggtgggctcc
ctccaggaggtcactctacaggagaagaagagggaatgctggttgctgagaaagggttcc
agtgtggacagtgatgagatggagtatgatgaggagctctatgcagcaggaaacatggtc
atatggagcaaagggagcaagagtcaagcctcccatgtctataaagcttttaccgtggac
agtccagtacaacaggcattatggtgtaactttggtattccacaaaagaagaaagatgag
caggagattttggagaagaccgtgtgtattgtccagagcagctgcgtgaatgtgcacagt
gtgacagggaaggactttatctcccctctaccctttcaggtctctaatctgtggcctact
aagtttggtctgctgttagaacgcaaaaactctgcacctgatgcttctcagagtcctccc
agggaacctcttcccacagtattcagcatgctgcaccctctggatgagattgccccagtg
gtgtgcaggcctacaggtctgttcgaggctgcacatgtgcagtacgtctctgacagcacc
atgaaaattgtcttctccaactgcgagccctccatagtcatgacatacgacaccgtgcag
tgcatacactctgtgtgggcgctgcgcaaagtcactccagatgagcagtccacagtgctg
aagtgtccggagcaggtagacacgccccaaggcctgatgccgcccagctttctgaccaca
cacctgaggaacgtctccaggatggactcgcctggttcaccctttcattgccacgccctg
cacaaccaaaacaggatgacctcatcaccaggcctccactcacggacacattcacccagc
atctccagcatggctgcactcagccggtcccactcccctggcatggcggcaccctccttt
tcggtcgcggcacggtttaacatgtcgtaccactcatcgtcccccagagggcacagcttc
ctgccctcgcccaacagcacggccaacgagtctgtgctggtcccggagatggagcccata
gtgcctgacctatgcatcgagcagctgtggagtgagactgcttcctcccacagggagatg
agctgccaggcctctaaggtgttcatcacctctgacttgtgtgagaacaagtacttgtgc
ttcctcgtggagtcccaccaacagctcagatgtgtaaaattcattgagagcaacaatcct
tcccagcttatctttgcatctgttgccactatccctgcaaaagacgcagcaccattacag
gatatagatgccatgctagttctagaagccaatggaagcttggttctgtacactggagtg
acaagggtgagcaaggtgtttgttcctggcctcctgtctcccaccttcagcctgtccaac
catgtaacccaccttagtacccccatggacagtgtgagcactcccgccaaggccacaggg
agacacataggaagactagaggaggtggccatgccctcccctgtatcagagctgaggggc
tccaccaagcaccacgaaacctcctggctgggcgactacacctttcaacagtctgtaccc
tacatccacgccctcagagaccccgtcagcagcagagtcaccctggagctaagcaacggc
acaatgctgaggataactatccctgaaattgctacctcagagatggtgaggaagtgcctc
caggcggtgcgcttcatcctgcccaaggaaacggccatgaaggtgctgataaagtggtac
aacatctacaacgcccccggggggcccagcgcacacctggagtggaacctgtttgtcacc
tgcttcatgactctcatgggctacaacacagagcgactgggttggacacgtaacctccat
tttgaagtgcccctctctcctgtgattgcaccaaaaaaggcccggccttcggacacaggg
tctgatgaggactgggactacatgtggtgctcagactaccacagacaagtggtgttcagg
catgggtgtggtgctgtgagtctggagtccaccgacacctctggctgtgaagagtctctg
tcttccacccctgccctgcatctggacccctctgccccactcttcccccacatcccagcc
ctgttctacgtgctgcacttgctctatgaggagctgaagctggacgagctgcagaggagc
gggggccgatcactggtgggccttctgcaacagttggccagggatctgcagctggaggag
tatatcgatctgtactggcgagattacccctcattcatcaccacgttcaaggagtcctgc
atcatagatccggcccagatggagcagatgcagcgtccatccttcctgagggcggagcct
ccgtgtgtgttcagctggctcagcagctgtctgaggggtgaggaggtagcacccttcccc
tatctgcccggcatctgtgagagaaccaaactactggtgctgagctacgccctgtacatc
attggagatgacaacgcaacttcagttgatgtgtcaaagtatctggccaagctctctgca
ggccagaagaagactgtcattgaatcagctttgaggagaccgagctgtatgaagcctgat
gctccaaatgaaagtttggctgtaaagcttgtagtttggctaacatcagaaggtttcaca
ttgaaagacctggaatctgtgccctttggtgtggctctgcccatcagagatgctatctac
cagtgtcgagagcaaccctgctctgactggtcagaggacgtctgcctattgattgggcga
caggatctcaccaaacaagcacacaaagtgaccgtggccaagggcaaagctgtaagtacg
gtgggtctggggctgatgctggaggctccagccaccacagaggcagaggaggaggaggat
ggtatgacagatctgaaccaggacgtaattagtcttatctggagccaggacctgcgcgtc
catgaggccagacgtctactccagagctcccgaccagtcagggtcagtgtggttcacctg
cctgaggtcagcgaccacgagtacatagaggagaaggagaacaaactgttgcagctttgc
cagcgtaccatggctctgccagtcggcagaggcctgtttaccctcttctcctaccaccct
gtgccaacggagcccctaccagtgcccaaactcaaccttactggtcgtgcgccccctcag
aacaccatggtagatctgaacagcgggaacattgacgttcctcccaacatgacgagctgg
tccagctttcacaacggggtggctgcgggcctgaaaatcgctccggcctcccaggtggac
tctgcctggatcgcctacaacaaacccaagagccccgagctggccaacgagtatgcaggc
ttcctcatggctctgggcctcaacggacacctcaccaagctggccacactcaacatacat
gactacttaaccaagggccacgagatgacaagcatcgggctgctcctgggtgtgtctgca
gccaagctgagcaccatggacatgtcaatcacccgactgctgagcattcacattcccgca
ctgctcccgcccacctccactgagctggatgtaccgcacaatgttcaggtggctgccgtg
gtgggcatcggcctggtctaccagggcacaggacaccgccacaacgcggaggtgctgctc
gctgagatcggtcgaccccctggtcctgagatggagtactgtacagaccgcgagtcctac
tcccttgccgctgggctagccctgggcatggtctgtctggggcatggcagtaacctaata
ggtatgtctgacctgaacgtccctgagcagctctaccagtacatggtgggggggcatcga
cgcacccacgccggcatcaacagagaaaaacacaagtcccccagctaccagatcaaggag
ggtgacaccatcaacgtggacgtcacctgtcctggagcgaccctggcgctggctatgatc
tacctgaaaaccaacaacaggtctatcgctgattggctgaaagctccagacaccatgttc
ctcctggatttcatcaaaccagagtttctgcttctcaggacactggccaggtgtatcatc
atgtgggatgagattctacccaactcggagtgggtgagcagcaatgtgcctcagataatc
caagagaacattgggaacccagtggtttcagaggatttgaacatggaaactttagcccaa
gcccatgactatataattgctggagcatgcatggcggtgggatttcgcttcgctggctcg
gccaactcggacgcattcgactgcttgtacaagtttgcaaggagtttcatgcagtgtttg
acatcagcgacagcgacggttacgggccactataacctgcagacatgtctgagcatggtg
ctgctggccctgtccatggtgatggctggctctggtaacctgaaggtgctgcagctctgc
cggttcctccacaagaggaccagtggagagatgaactatggcttccacatggcccaccac
atggccctgggcctgctcttcctgggaggagggaggtacactctcagcacctccaactcg
gccatcgctgccttgctttgtgctctctacccccatttccctgcccacagcacagacaac
cggtaccacctgcaggctttgcgtcacctgggtgtcctggcggctgagcctcgtctgctg
gtcccagtcgatgtggacacactgaaaccctgctacgccctgctggacgtcacatacaag
gagacgccatggtatgaggagactacagtggagctgatggcccccaccatgttgcctgag
ctgcagctcctcaaaaaggtgaaagtaaaaggaccaagatactgggagctgtccatagac
atgagtaaagggactcaacatctagagtccattctttccagagatggggttctgtatgtg
aagctgcgtgcggggcagctgccctataaggatgaccctcggggttggaagagtctatta
gcacccaacgtcaacaacaggaactcagaagtccgcacattcaagcccgaggccatctca
accttcacctccgacgctgccttggtctcctttgctgagtacttttgtaaatcctcggag
agcgtgaaacataaacgggacactttggccttattctctgccattctatatgagtgtgtc
actcaggagaaccctgagatgctgccgacatacatcgctattgatcaggcggtacggacc
ctggagcagacggagatgtgtgagacgtttgctctgtggcaaatgagactggtgttggag
ctgtgtgagagcagggtgctgcagcacagactgagggagggggcacagggcagggggctg
ctgctcagctctgagttcctgcctgtcatgaaaaactctgctgatggcaccctggaccgc
tggctcactgataacagccatgtattaaggtcatacatgagtggccagtcccttactgag
gacatgctgtccaacatgctggcttgcttcctggtttaccactccatcccctgcctcagt
aagctgtctgccacacacctggaaggaagtacatcgttccctgagctcctgttgaagttc
agtcagctgggcatacctgtacgcgccctgctgcgtttgggccctctgcttctagggact
gcgggcttctggaccggccaactggcctgttga
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