Oncorhynchus nerka (sockeye salmon): 115113147
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Entry
115113147 CDS
T07952
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-like
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03010
Ribosome
one04120
Ubiquitin mediated proteolysis
one04137
Mitophagy - animal
one04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
115113147
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115113147
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115113147
04137 Mitophagy - animal
115113147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
one03011
]
115113147
04121 Ubiquitin system [BR:
one04121
]
115113147
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115113147
Ribosome [BR:
one03011
]
Ribosomal proteins
Eukaryotes
Small subunit
115113147
Archaea
115113147
Ubiquitin system [BR:
one04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
115113147
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115113147
Exosomal proteins of colorectal cancer cells
115113147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
IBR
Ubiquitin_5
TBK1_ULD
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
115113147
NCBI-ProteinID:
XP_029496304
LinkDB
All DBs
Position
LG28:21379691..21387496
Genome browser
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPAEECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtcaaaaccctcacggggaagactataaccctcgaggttgagccttca
gacaccattgaaaatgtcaaggccaaaatccaagacaaagaaggtatccctcccgatcag
cagaggttgatctttgctggtaagcagctagaggatggacgcacactgtcagactacaac
attcagaaggagtccactctgcatttggtgctgagactccgtgggggtgccaaaaagagg
aagaagaagtcctacaccactcccaaaaagaacaagcacaagaggaagaaggtcaagctc
gcagtgctcaagtactacaaggttgatgaaaatggcaagatccaccgtctgcgtcgtgag
tgtccagctgaagaatgtggtgctggtgtgttcatggccagccacttcgataggcactat
tgtggcaagtgctgcctcacttactgcttcaacaagccagaggacaagtaa
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integrated database retrieval system
