KEGG   Oncorhynchus nerka (sockeye salmon): 115113181
Entry
115113181         CDS       T07952                                 
Name
(RefSeq) protein bicaudal C homolog 1-A-like isoform X1
  KO
K18756  protein bicaudal C
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:one03019]
    115113181
Messenger RNA biogenesis [BR:one03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     115113181
SSDB
Motif
Pfam: KH_BICC1 KH_BICC1_1st KH_1 SAM_1 KH_GLD-3_1st KH_Vigilin SAM_2 KH-I_KHDC4-BBP KH_NusA_2nd KH_GLD-3_3rd KH_Mug60-KHD4 SAM_Ribosomal_mS41
Other DBs
NCBI-GeneID: 115113181
NCBI-ProteinID: XP_029496387
LinkDB
Position
LG28:complement(24170653..24245470)
AA seq 991 aa
MATQCDSLSGYLQQSDQGSNSERSTDSPVPGSEDDLSGPHALPDPEWTEERFRVDRKKLE
IMLLAAAGGRVNGGEDFFQKVMDETKTQIAWPSKLKIGAKSKKDPHIKVCGKRDNVREAK
DRIMSVLDTKQTNRVTLKMDVSHTEHSHVIGKGGNNIKKVMEDTGCHIHFPDSNRNNQAE
KSNQVSIAGQPGGVEAARAKIRELLPLVLSFELPAIVQPDPGSPTVQHISQTYNLTVSFK
PPTRLYGTTGVVRGSQNNSSAVKRGTAMLLEHLAGSLASAISVSTHLDIAPQHHLFMMGR
NGSNIKHITQRTGAQIHFPDPNSPQKKSTVYIQGTIESVCLARQYLMGCLPLVLMFDIKE
DIEVEPQCITALMEQLDVFISIKPKPKQPSKSVIVKSVERNAVNMYEARKFLLGLESNGV
SSAMSPSSNGPTLICPVGLDILASAGLGLSSLGFLGASAPHSLSSSPAPNSVLNSLNSSM
SPMQNPSPSTPSPSSSLWPSSLTSTQGFSSQLMMHPVAQATLSSILLSGVQGYTQNTPSP
PPGLSPIDKQTNGVPDCSKGPCTINGHVKHPGSVYGRMSSASLADTVLNPNQCDSVQEAS
GHNPSEPRSSKSNQDQGSDTFVEVGMPRSPSHSANGNELKQMLASCKTSGKRQAVELLQG
TKNSHLQYVCPELHSDCLLSDPESSASDSPVTDKRAPGSERAAERAAQQNERDRIRLVPH
SSFANMQGQLEALEYEQKKLLATKAMLKKPVVTEVRTPTNTWSGLGFSKSMPAETIKELR
RANHVPYKPTMSTTYEVNSDYEGSPLSLSRSGSREGVGNGSDSDNWRDRNGGGNGLPSHA
EFPVSVCSPKRKQNKSAAEHYLSSSNYMDCISSITGSNGCSLQSSLKGSDLPELFSKLGL
GKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISGVNDYELNTNRRKLFE
APIRSSFLEGGASGRLSRQFHADMASVSGRW
NT seq 2976 nt   +upstreamnt  +downstreamnt
atggctacccagtgcgactctctgagcggatacttgcaacagtcggaccagggctcaaat
agcgagcgtagtactgactccccggtccccgggtccgaggatgacttgagcggaccccat
gccttaccagacccggagtggacggaggagagatttcgagtggaccgcaagaaactggaa
atcatgttattagcggccgctgggggacgagtcaatggtggcgaggatttctttcagaag
gtcatggatgaaaccaaaacacagatagcgtggccttccaaattgaagatcggagccaag
tccaaaaaagatccgcacattaaggtttgtggaaagagagacaatgtgagggaagccaaa
gaccgaatcatgtcagtcctcgacacaaagcagactaacagggtaacccttaagatggac
gtgtcccacacagagcactcccacgtcatcggcaagggaggcaacaacatcaagaaggtg
atggaggacacgggttgccacatccacttccccgactccaatcgcaacaatcaggcggag
aagagcaaccaggtgtccattgcaggtcagccaggaggggtagaggcagctcgagccaaa
atcagggagctgctccctctagttttgtcgtttgagttgccggccatcgtgcagcctgac
ccaggctcccccacagtgcagcacatctcccagacctacaacctcaccgtatccttcaag
ccccccacacgtctctacgggaccactggagtggtccgcggctcccagaacaactctagt
gccgtcaagaggggcactgccatgctgctggagcacctggcgggaagccttgccagtgcc
atctcagtcagtacccacctggacatcgccccgcagcaccacctcttcatgatgggccgt
aacggcagcaacatcaaacacatcacccagagaacaggagcccagatccacttccccgac
cctaacagcccccagaagaaatctactgtctacatccagggcaccatcgagtctgtctgc
ctggcgcgccagtacctcatgggctgcctgcccctggtgctgatgtttgacataaaagag
gacatcgaggtggagccccagtgtatcacagctctgatggagcagctggatgtcttcatc
agcatcaagcccaaaccaaagcagcccagcaagtctgtgatagtaaagagtgtggagcgg
aatgcagtgaacatgtacgaggcccggaagtttctgttgggtctggagagcaacggggtg
tcatcagccatgtccccctccagcaacggccccaccctcatctgtcctgtcggcctggac
atcctggcctctgctggcctggggctgagcagcctgggcttcctaggtgcatcagcgccc
cattctctcagtagctccccggctccaaactctgttctcaacagtctgaactcttccatg
agccctatgcagaaccccagccccagcaccccgtctccctcctcctcactgtggcccagc
tctctcaccagcacccaaggcttctcgtctcagttgatgatgcaccctgtagcccaggcc
actctgagcagtatcctgctctctggggtccaggggtacacccagaacaccccctcccct
ccccccgggctttccccaatcgacaagcagaccaacggggtccctgactgctccaaaggc
ccctgtaccatcaatggacatgtcaagcatcctggctcagtctatggcaggatgtccagc
gcgtcactggcagacacggttctgaaccccaaccagtgtgactcggtccaggaggccagc
ggacacaacccgtcagaaccccgctccagcaagtccaaccaagaccaaggctctgacacc
tttgtggaagtgggcatgcccagaagcccatctcactcagcaaatggaaacgagctgaaa
cagatgctggcttcctgtaagacgtcagggaaacggcaggcggtggagctcctccagggg
accaagaactcccatctccagtatgtctgtccagagctacactcagactgcttactgtca
gacccagagtcgagtgcttcagacagcccagtgacagataagagggcaccgggcagtgag
cgggcagcagagagggcagcacagcagaacgagagggacaggatccgcttggtaccacat
tcttcctttgccaacatgcagggccaactagaggcgcttgaatatgaacagaaaaagctg
ttagcaaccaaggccatgttgaagaagcctgttgtgactgaggtgcggacccccactaac
acgtggagtggcctgggtttctccaagtctatgccagcagagaccatcaaggagctgcgc
agggccaaccacgtgccctacaaacccaccatgagtaccacctacgaggtaaactccgac
tatgagggctcccccctgtctctttcccgctccggcagcagagagggggtgggcaacggc
agtgactctgacaactggagagacaggaatgggggtgggaacggtcttcccagccacgcc
gaattcccagtgtctgtttgcagtcctaagaggaaacagaacaaatccgctgcagagcac
tatctgagcagcagtaactacatggactgtatctcctcgatcaccgggagcaatgggtgc
agtctccagtcctctctgaaagggtcggacctcccggagctgttcagcaagctgggcctg
gggaaatacacagacgtgttccaacagcaggagattgatctccagaccttcctcactctt
acagaccaggacctgaaagagttgggcatcaccacatttggagcacgcagaaaaatgctg
cttgccatctctggtgtgaatgactacgaactgaacacgaaccgaaggaagctgtttgag
gctcctatcagatcctccttcctggaagggggagccagcggtcgtctgtctcgtcagttc
cacgctgacatggctagtgtcagtggtcggtggtag

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