Oncorhynchus nerka (sockeye salmon): 115113308
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Entry
115113308 CDS
T07952
Name
(RefSeq) tight junction-associated protein 1-like
KO
K06105
tight junction protein 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115113308
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Gene cluster
GFIT
Motif
Pfam:
Pilt
TPR
Rac1
HIP1_clath_bdg
CALCOCO1
ATG17_like
Prominin
Bacillus_HBL
Med9
DUF4200
OmpH
VMAP-M1
TPR_MLP1_2
BRE1B
Uso1_p115_C
DUF4795
7TMR-HDED
betaPIX_CC
Motif
Other DBs
NCBI-GeneID:
115113308
NCBI-ProteinID:
XP_029496682
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Position
LG28:34669786..34791527
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AA seq
700 aa
AA seq
DB search
MTSAAPARKPYRKAPPQHRETRNSLPLFREDLSGSTPPAHTAGPNLPDPCQDSLSDADRI
KILQQQNEDLRRRLSHTTHKMEAMETEFETSRHYMREEMGRTRDDLEKMRDKFRRLQNSY
TASQRANQDLEEKLHALLRKVERDKKTMDQEIVELTNKLLDAKNTIDKLEELNERYRQDC
NLAVQLLKCNKSHFRNHKFADLPYELQDMVNKHMKASLPDKSSQGAQGQDSDTMSLTPAD
VVPTSVIARILEKPEPLVLNSAQSSSSAGRPQAEDVFVHVDMTGPQAGGGGRENGGPGHS
SRAPAQSSQAQELLQQNGMCRSQSSLSADGQSGEEGREGGAFEKLNPYPAPPPPHPLYPG
RKVIEFSSDDKVKIPKNSPLPNCTYATRQAISLSLVQNDEENERQRTVPNSPAVSDGGWR
SGTSSSSGGGGQRDRCRTPTQLDTADPLSNQSSPFSSPPQPPSAFASSGSSEEDLLANWQ
RMFVEKMAPSSEGTLVNRTSFSSETVKDLERTRTGKPVGGGSDRGALRGAYSDGEEGSST
RSWTASRESSLDTDTSSMADLRTRRGHYGADFSTEESEQLLMALDPLDNDRDNTSGDTVS
TAITVETSPAEANRNDFVDETGSVGSSAEERDILPQDFPIKAPRVLAGLEDYTKNTPPLP
ANSSTSTPGRPLKSPKRMGVHHLHRKDSLTRAQEHGNLLD
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgctgccccggccaggaagccttaccgcaaggctccgcctcagcaccgcgag
acacgaaacagcctgcccttgtttcgagaggaccttagtgggagcacgccgcctgcccac
accgctggccccaacctgcctgacccctgccaggactccttatcagatgcagacaggatc
aagatcctgcagcaacagaatgaagatctgcgccggcggctctcccacaccacccacaag
atggaggccatggagacggagtttgagaccagccgccactacatgcgggaggaaatgggt
cgtacccgcgacgacctggagaagatgagagacaagttccgcagactgcagaacagctac
actgcctcccagcgggccaaccaagacctggaggagaagcttcatgccctgctccgtaaa
gtggagagggacaagaagacaatggaccaggagatagtggagctcaccaacaaactcctg
gacgccaagaacaccatcgacaagctggaggagttgaacgagcgctatcggcaagattgc
aatttggccgtgcagctgttgaagtgcaataagtcccatttcagaaaccacaagtttgca
gatctgccctatgagctgcaggacatggtgaacaagcacatgaaggccagtctgccggat
aagagttcccagggggcccagggccaggactccgacaccatgagcctgacgcccgccgac
gtggtgcccacctcagtcattgcccgcatcctggagaagcctgagcctctggtgctcaac
tctgcccagtccagcagcagtgcaggccggccccaggcagaggacgtgtttgtgcatgtg
gacatgactgggccccaggcaggaggagggggtagagagaacgggggtcccggtcacagc
agcagggccccagcccagagcagccaggcccaggagctcctccagcagaacggcatgtgt
cggagccagagcagcctgtcagcagacggccaatcaggagaggagggtagagagggtggt
gccttcgagaagctcaacccctacccagccccccctccgccccaccccctctatcccggc
cgcaaggtgatcgagttctcctcggacgacaaggtgaagatccccaagaacagccccctg
cccaactgcacctacgcaacacgccaggccatctccctcagcctggtgcagaacgacgag
gagaacgagcgccagcgcaccgtgccaaacagccccgctgtgtcggacgggggctggcga
tctgggacgtcctcctcctcagggggaggggggcagcgtgaccgctgccgcacccctact
cagctggacacagcagaccctctctccaaccagtccagccccttcagcagcccccctcag
ccccccagcgcctttgccagctcaggtagctccgaggaggacctgctggccaactggcag
cgcatgtttgtggagaagatggcaccatcctctgagggcaccctggtcaaccgcacctcc
ttcagcagcgagacggtcaaggacctggagaggacccggaccggcaagccagtgggcggg
ggttccgacaggggggcactacggggggcctactcggacggggaggaggggtcctccacc
cgcagctggacagcaagccgagagtccagcctggacactgacaccagcagcatggctgac
ctccgcaccaggagggggcattatggagcagacttctccacagaggaaagcgagcagctg
ctgatggccctggacccactggacaacgaccgagacaacaccagtggcgacaccgtgtca
acggccatcactgtggagaccagcccggcggaggccaataggaatgattttgtggacgag
actgggtctgtaggcagctctgcagaggagagagacatcctgccacaggacttccccatc
aaagccccccgggtcctggcagggctagaggactacacaaagaacacccctccccttccc
gcaaactcctccacttccacccccggccgacccctgaagagcccaaagaggatgggagtc
caccacctgcaccgcaaagacagcctgacccgggcacaggagcatggtaacctgctggac
tga
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