Oncorhynchus nerka (sockeye salmon): 115113338
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Entry
115113338 CDS
T07952
Name
(RefSeq) uncharacterized protein LOC115113338 isoform X1
KO
K01754
threonine dehydratase [EC:
4.3.1.19
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00260
Glycine, serine and threonine metabolism
one00290
Valine, leucine and isoleucine biosynthesis
one01100
Metabolic pathways
one01200
Carbon metabolism
one01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
115113338
00290 Valine, leucine and isoleucine biosynthesis
115113338
Enzymes [BR:
one01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.19 threonine ammonia-lyase
115113338
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Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
115113338
NCBI-ProteinID:
XP_029496727
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Position
LG28:complement(36688490..36700356)
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AA seq
732 aa
AA seq
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MNFAAQFIYANYIRDGSPNRVGFSDSDENDPFWQRWDSTDSSPIHCTPLDTEGFPTRSLA
VDVPPQHPKEPNTLTAASPVVTPAVAPSAPRVAPLPVLLHPCSAPLLSPQGQLTTPATTS
SLHHLPSPRARISTKSSRATSKPLPVPKSNAISNPCCPPPPETAPPPPPASLALPRSTVV
AKAPLSHVPAPVIPSPDPGNRFLLPAFHVLICLLLRLVLSFILFFLPSEAQRLGSTKQGC
FTSSKTTCNKDGPVCNGVAGVRPTLIHPERLKDFGIEEEECLNGEVKTKETKVVGAPEIQ
LMDPPKTNKKRGSESKAITQPKPEYLRFDDISAAAFKIQMRMQKTPCMYSRLSKQYGMEI
FLKKEHLHYTGSVKERGVLYMLTSLSQEQQKKGVIVATDCSFSMAVAHHAVELRIPVFVI
MPASCAQPHLRMYRDYGAMVISYGSTARDSLKHARHLAKENGYLYLEEDDSAVYLAGLGT
VGMEIYEQVPKLDAVIVPAGGQCSLLVGTAAAIKHLNSRITVIGVEPEGFPLLLQSLKTG
SPVTRELYSTPNKKLYGDLFEHSMGTHTFQLAKTFVDKVISVREEDSLVAMLRFQEFEHS
TVDTEGAMGLAAILAGQLPELKGKRVAVVVSSANMELDLIRQCVDRALVLDDRVNKFTVQ
LGDFPGDMAKLLDILAREDIKLLDVCHRRHNDRGDLFKALVECVVETRDKTQSTQLRRTL
SERYPTLRWLDR
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgctgcccagttcatctacgccaactatatcagagatggatcgcctaacaga
gtgggattcagcgatagtgatgagaatgaccccttctggcagaggtgggactctacagat
tcatcacccatccactgtaccccattagacacagagggatttcccacccgatccctggct
gtagacgtacccccccaacaccctaaggaaccaaatactctcactgccgcttctcctgta
gtgactcctgctgtggctccttctgcacctcgtgttgcacctcttcctgttctccttcat
ccttgttctgcacctcttctctctccccaaggtcaactaactacaccagccacaacctcc
agtctccaccatcttccttctcctcgtgcaaggatatctaccaagtcctctagagccacc
agtaaaccccttcctgtccccaaatctaacgccatctccaatccctgttgtcctcctcca
cctgaaacagcacctccaccacctccagcttcccttgctctccccaggtccacagtagta
gccaaggccccccttagccatgtccctgcccctgtgataccctctccagacccggggaac
agatttctcttgccagccttccacgttctgatatgcctcctcctccgcctggttctatcc
ttcatcctcttcttcctccccagcgaggcgcagcgtcttgggtcaactaaacagggctgc
ttcacctcttccaagactacctgcaacaaggacggccccgtttgtaacggggttgcgggc
gtgcggcccaccctcatccacccagagcgcctgaaggattttggtattgaggaggaggag
tgcctcaatggggaagtcaagaccaaggagaccaaggtggtgggggcacctgagatccag
ctgatggacccgcccaagactaacaagaagagaggcagcgagagcaaagcaatcacacaa
cccaagcctgaatacctccgcttcgatgacatcagtgctgcagccttcaaaatccagatg
aggatgcagaagaccccctgcatgtactccagactgtccaaacagtacggcatggagatc
ttcctgaagaaggaacacctccactacacaggctcagtgaaggaaagaggcgttctctac
atgctcacctccctcagccaggagcagcagaagaagggggtgattgtggctacagactgt
agcttctccatggccgtggcccaccatgcagtggagttgaggatcccagtgtttgtcatc
atgccagccagctgtgcccagccccacctcaggatgtaccgtgactacggcgccatggta
atctcctacggcagcacggccagggactccctgaaacacgcccgccacctggccaaggag
aacggatacctttacctggaagaggatgatagtgctgtgtacttggcaggactgggcaca
gtaggcatggagatctatgagcaggtgcccaaactagatgcagtcattgtgccagctggt
gggcagtgtagtctactggttggcacagcagccgccatcaaacacctcaactcgcgcatc
actgtcataggagttgaaccagaaggattcccgttgctactacagtccctcaaaacaggc
agcccggtgactagagaactatacagcaccccaaacaagaagctttatggagacctattt
gagcactcaatggggacccacaccttccagctggctaagacatttgtcgataaagtcatc
tctgtcagagaggaggactctctggtagccatgctaaggttccaggagtttgaacactcc
acagtggacacagagggagccatgggactggcggccatcttggctggtcaactaccagag
ctgaagggcaaaagggtagctgtggtggtcagcagtgctaacatggagttggacctgatc
agacagtgtgttgaccgagctctggttctggacgaccgggtcaacaagtttacggtgcag
ttgggggactttccaggggacatggccaagctactggacatcctggcccgagaggacatc
aagttgttggatgtttgccaccgtagacacaatgacagaggcgatctcttcaaggctctg
gtggagtgtgtggtggagaccagagataagacacagagcactcagctccgcaggacactg
tctgagcgctatcccacactacgctggctggaccggtga
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