Oncorhynchus nerka (sockeye salmon): 115113346
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Entry
115113346 CDS
T07952
Symbol
cfap46
Name
(RefSeq) cilia- and flagella-associated protein 46 isoform X1
KO
K24938
cilia- and flagella-associated protein 46
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115113346 (cfap46)
Cilium and associated proteins [BR:
one03037
]
Motile cilia and associated proteins
Sperm associated proteins
115113346 (cfap46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_CFAP46_N
TPR_12
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
115113346
NCBI-ProteinID:
XP_029496742
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All DBs
Position
LG28:complement(37251908..37351243)
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AA seq
2661 aa
AA seq
DB search
MDLHIRQYLTKARQQKDTDALNAAYDMIREGSDSRCFCPELYVLCAEQALQLGCADISRD
CLMMYFEGKPPANQFLCRAYLCQGQLESPQSFGSVEEIEKAVIYFLKAIEISKVKPRYHF
LVFNASVLYFQMVRPLLRSGPRQHLVPTLTQVVKALEEVGEQDYSWRAQLMMHLVECLVD
AGKGKEASSFAKATSDFIESHIPDLYPKIFSLQVRHKLFDFTKTPPKTEASPVLSVIYKM
QKLKHKVDDVCEARKEDAARIKEIFLLLMHSAAAQSPVIARGSNPCLAESPSPIPPADRV
AFLLELAFLALQLKHHQMAADCLSELKTTGVTSVGQCIMMECVQCDLDLQKKQEGGMKDY
SKANVEAQLKVIGRLDKVLQSAVREGDAKVMQAVCASQWNTCLPLLQHNLRRNVKGALLK
VAQVLEDTYSVQLEMRCQVHSELAVIEEEEGRLEPALLHLQKALLLDERGVHHERLTSAL
NLLQLRGTLYQTPSSTEDQAAMLIQQAKNGQPQEEVRKRRPMLVNAGLTLAPDAFQVVLD
ADSTAKIPSGTSGPGGVAHLSAKAQHHSACVEKVQGHLSRQGAGKNDRERVKLWAALAKT
ARKQEVWDVCRAACRFCLLYDDGRWKAPKSDCERKAGDESPVEGGLHGDRRPSAGRLSQS
AEKDLLRLLAEVCFINAEATIHKLRSEGVQLNTPAAPPEERGLRLPEDNPQWAVYRDWIQ
DLSAYATSNFLRGAELGAEIREAWVVVNAAVYLWNYNSHLVAVGEQRRLLPTFQRAVELL
RQTGHAGEPVLLVMLCDAVAQGLIQPWFVSAAGPGTGQGREDSGSRGELRKKVAGKGAER
TGSIHSLPLDHAALQDMRKALELCDYALHLSNGNVPGESVPIAARKQVISTWVWTKRLLQ
QQIGQKLDIDDECKNEAVSAMTRVLVGVEMLLCSSHPRQIEFSVPSLSTLVRMASDCKWS
DPVVELQVWTHLACFSHQAQDHNLVMTCSHNALQLEAAAAQRLTVMAYALYSQSSVQEML
SNAACLRGLSMVHKSNGHPHSYREALQMLQSSVSYAEQAGNSVLCMATARHYWNNCLPLT
ETSLERQQLRQPLEKILKALVHTSKKDPTQGKEKGGATLTGMPSVTSSLEASSMGSPEDD
LTLRAAMYGLLFHIHADSSDWTGALTLLEQAIRDMPRTRHRLLLFKYRVLVKARLGESVV
IDMQKFRDEGELYCSHMWHRVALCSGEMLQQLACYQNAITSLLSVKSQWQKADFLLEFGE
WLYCQNFPLSDAQHQIQWAIDILLHMITDQEESNEKTGSKGSKLKELERRENSQGDESGE
GTGLIPVKVQSHVGVQGVVSGPCISDLREVRRLDSLVRAHTLLAVMGDRASPQHQHNLLR
AYSLVLQIWQVSMATACEVIKEMMKIPLVPTSRPCPSATAKKDKDKEKDKGKKSKEPPPA
EEKPKARRPQDDVLPSSPEEWAQYDCPEDVRQAFRYDTSPHCINRHSLSKQTQSLFFLDL
LVKELQSLSLTHLTLPILHLAEVIAHDLLDRRSLSDLYRLRIVRSCSQLDMETSTVYHEK
LLSLTGIHEQEQMECRKAIALQRERNRLYMGYNGKTDNEKSKVDHICLSGKQCGDLWSQD
IWLDKAEICLGMGLYQPARQLLAEAHLVAKELGDQAAAGRSLLSLAILANKEQNHSQALA
LLEKAQDMGGDEDFWYKLTLALLTATVTQRGQDIDTKTYQIVKQGCGALKSMLEKRHNRA
PALRFLITSLESRGAVERLHAASPVEPGEALSTQSVQNLMAACDTLRESTSEFLRMGHRE
QAAEALLEHAQALRILAKHTGDEGKLRHLLDAYSFMQQAVSVQEHVVLNAQSLFPSQECQ
PLSLPATRRLLRVRLALAELSLTMLEQVCAEENRLALAQDRKASVERTVEEFVRITPDPG
SVEQEWIATGRTLGQVALSQLATVNFLSLDCVETRASSLSLMGKCLRLLAMQRDPLYPFT
LWDGHNLEEDRSESKASPEEEEELTGENGLESSRTEPRQYAAKCAELQRRRRSARQLLAQ
ASETLAQAISLSLQHKLPSSILSEACLNMLECHGQFDPCATGQYLALLQSCSCTAMMADI
LRSACTDTRVSQLSALLNLHSNLLPSQVETPTSLLKGVEDSLNGLSKTYSHLTINPSHLS
LLGELPSNLKILLLQHTQDRSTLYGAFYERSKLTESQRGKAMQVSGMLVCTRVAKVAVQP
RALLDLRDRTQAFKRETKHNFLKEAHWLGNEGRAGSERHVHLKSNSEEKLESHFKAIVQE
MEDYLCPILSQFDFSCFGHQTPSISIPECIRPKDKEEKAGLDKGLAVGSPAELGEYVVLL
ADWMLMELPLEALAILQEEGLSSVSRDFSLQLLHTRLQREEPVESDNKKETKGGKGAKGK
VDQSKAIKMVPVNRVLPPNTLPVDTHNFKYIIDPYNEEEYEGSSLTERMKRTLEAYSQQF
TPLWEGFLGSERTPSLAELEQLLTNCSAFIFHGMERFLANIPPSKLAALNLSECQMAVLF
DLVQNSASMLRQSKLDVQKSDGHLALERPLETALLLTLSGVRCVLLNQWHSSPQRNINNM
DSVMENLLRVGLTSGQTVHALRKGEVQSTEKDTNTAGSDDTIGHEDSVNRDGNAHDAQPR
LTTSSSAFNCVIYGLPNLVIT
NT seq
7986 nt
NT seq
+upstream
nt +downstream
nt
atggatcttcacattcgccagtatttgaccaaggcacgccaacaaaaagacactgatgcg
ctgaatgcagcctatgacatgatcagagaggggtcagattcgcgatgcttctgcccggag
ttgtacgttctgtgcgcagaacaagccctacagctgggatgtgcagatatcagccgagac
tgcctaatgatgtactttgaagggaaacccccagctaatcaattcctgtgtcgagcgtac
ctctgtcagggccagctggagtctccacagagctttgggagtgtggaggagattgaaaag
gctgtgatttattttctgaaggctattgagatttcaaaggtcaaaccaagataccacttt
ttggtgttcaatgcttcagtgctctacttccagatggtccggccgctcctgcggtccggg
ccacgccagcacctggtgcccaccctcactcaggtggtgaaggcactggaggaggttggg
gaacaagactacagttggagagctcagctcatgatgcaccttgtcgaatgccttgtggat
gctgggaaagggaaagaagcttctagttttgccaaggccacctcagacttcatagagtcg
catatccctgacctgtatccaaagatattttccctacaggtacgacacaagctgtttgac
ttcactaaaacccccccaaaaacagaagcaagtcctgttttatcagtcatctacaaaatg
cagaagctcaaacataaggttgatgacgtttgcgaggccagaaaagaggacgctgccagg
attaaggagattttcctgctccttatgcattctgctgcagcccaatcccctgttatagcg
cgtggctccaacccttgtcttgcagagagcccctcacccatccctccagctgacagagtt
gccttcctcctggagctagcctttctggccttgcagttgaaacatcaccagatggcagcg
gactgtctgagtgagctgaagacaacgggagtcactagtgttggccagtgcatcatgatg
gagtgtgtccagtgtgacctggacctccagaagaagcaggagggggggatgaaggactac
tccaaagccaatgtggaggctcagctgaaggtgataggccgactggacaaggtgctgcag
agtgcagtaagagagggggatgccaaggtgatgcaggcggtgtgtgcctcacagtggaac
acctgtctgcccctccttcagcacaacctcaggaggaatgtcaagggggcactcctcaaa
gtggcccaagtcctggaggacacatacagtgtgcagctggagatgcgctgtcaggtccac
agtgagctggcagtgatcgaggaggaagaggggaggctggagcccgctctgcttcacctc
cagaaggccctgttgctggacgagagaggggtgcaccacgagcggctcacctcagccctt
aacctccttcagcttcgcggcaccctatatcagacccccagcagcacagaggaccaggct
gccatgctcatccaacaggctaagaatggtcagccacaggaggaggtgagaaaaagacgt
cccatgctggtcaacgcaggcctcaccctggcccccgacgctttccaggtggtgctcgac
gcagatagcactgcaaaaatcccctcaggcaccagtggacctggcggtgtggctcatctc
tctgctaaggctcagcaccactctgcatgtgttgagaaggtacagggacacctgagcaga
cagggagctggcaagaatgacagggagagggtgaaattgtgggcagccttggcgaagaca
gctaggaagcaggaggtttgggatgtgtgtcgagctgcctgtcgtttctgtttgctctac
gacgatggacgatggaaagctcctaaatcagactgtgagcgcaaggcgggggacgagagc
ccagtggagggtggactccatggtgaccggcgtccatcggcagggcgactgtcccagagt
gcggagaaggacctgctccgtctgctggctgaagtctgcttcatcaatgctgaggccacc
atacacaagctccgctctgagggggtacagctcaacaccccagccgcccctcctgaggag
agaggactccgtctccctgaggacaatccacagtgggctgtctacagagattggatccag
gacttatctgcctatgccacctccaacttcctgcggggagccgagctgggagcagagatt
cgcgaggcctgggtggtggtcaatgcagccgtgtacttatggaactacaacagccaccta
gtggcagttggggagcagcgacgcctcctgcccaccttccagagagccgtggagctgctg
agacagactggacacgctggggagccggtgctgttggttatgctgtgtgatgcggtggcc
caggggctgatccagccctggtttgtgtcggctgctgggccgggaactggccagggaagg
gaggacagcggaagcaggggggagctgaggaagaaagtagccgggaagggagccgagagg
acaggcagtatccacagcctccccctcgaccatgcggccctccaggacatgcggaaggct
ctggagctgtgtgactatgcactgcacctttctaatggcaatgtgccgggagagagcgtc
cctatcgcagcgaggaaacaggtcatttctacgtgggtgtggaccaagaggctcctccag
cagcagattggacagaagctggacattgatgatgagtgtaagaatgaggcagtgtcagcc
atgacacgtgtactggtaggagtggaaatgctgttatgcagcagtcaccccaggcagata
gagttctctgtccctagtctctctacgctggtccgcatggcgtcagactgcaagtggagt
gaccctgttgtcgagctgcaggtgtggacacacctggcttgcttctctcaccaggcccag
gaccacaacctggtcatgacctgcagccacaatgcattgcagctggaggccgctgcagct
cagaggttgacggtcatggcctatgctctttacagccagtcgtccgtgcaggagatgttg
agcaatgctgcatgtctaagaggattgagcatggtccacaagtcaaatggacatcctcac
agttacagagaagccttgcagatgctccagtccagtgtcagctatgcggagcaggcaggt
aactctgtcctgtgtatggctacagcgcgccactactggaacaactgcctgcccttgact
gagacctcactggagagacagcagctccgacagcctctagagaagatcctgaaagccctg
gtccacaccagcaagaaagacccaactcaggggaaagagaagggaggggctaccctgact
gggatgccctctgtgacctcatcgctggaagcctcaagcatggggagccctgaggatgac
ctgaccctgagagcagccatgtacggcctgctgttccacatccacgcagacagctcagat
tggacaggagctctgacgttgctggagcaggctatcagagacatgccccgcaccagacac
aggctgctcctgttcaagtaccgggtgctggtgaaggctcggctgggggagagtgtggtg
atagacatgcagaagttccgggatgaaggggagctctactgctcccacatgtggcaccga
gtggcgctgtgttctggggagatgctacagcagttggcctgctaccagaatgccattact
tctttactgagtgtgaagagtcagtggcagaaggcggatttcctgttggagtttggggag
tggctgtactgtcagaactttcccctttctgatgcccagcaccagatacagtgggctatc
gacatcctcctgcacatgatcactgaccaggaagagagcaatgagaagaccggttccaag
ggaagcaaactgaaagaactggagaggagagaaaattcccaaggagatgagtcgggagaa
gggacagggctgataccagtgaaggttcagtcccacgtcggggtgcagggggtggtgtct
gggccctgtatctctgacctcagggaggtgaggcgtctggacagcctggtcagagcacac
actctgctggctgtcatgggggacagggcatccccccagcaccaacataacctacttagg
gcctatagcctagtgctgcagatctggcaggtgtccatggcaactgcatgtgaggtaatc
aaggagatgatgaagattcctctagtcccaacgtcccggccatgtccctctgcaacagcc
aaaaaagacaaagataaggagaaggacaaaggcaaaaaatctaaagagccaccccctgct
gaggagaagcccaaagcccggaggccacaggatgacgtgttgccctccagcccagaggag
tgggcacagtacgactgtcccgaggatgtccgccaggccttcagatatgacaccagcccc
cactgcatcaacagacacagcctcagcaaacagactcagagcttgttcttcctggacctg
ctggtgaaagagctgcagtctctttctctcacccacctgactcttcccatactgcacctg
gctgaggtcattgcccatgacctgctagacagaaggagcctctctgacctctaccgtctc
agaattgtgaggagctgttctcagctggatatggagacgtctacagtgtaccacgagaag
ctcctgagcctgactggtatccatgagcaggaacaaatggagtgtcgcaaagctatagct
ttacaaagagagagaaaccgcctgtatatgggttataatggcaaaacggacaatgagaag
tctaaggttgaccacatctgtctgtctgggaagcagtgtggggatctgtggagtcaggat
atctggcttgataaggctgagatatgccttggtatgggactgtaccaacccgccagacag
ctattggcagaggcccatctggtggctaaggagctgggagatcaggctgcagcagggagg
agtctgctctctcttgccatcctggccaataaggaacagaaccactctcaggccctggca
ctgctggagaaggcccaagacatgggaggtgatgaggacttctggtacaagctcaccctg
gccctgctgacagctacagtgacccagaggggccaggatatagacaccaagacatatcaa
atagtaaagcaaggctgtggagccctgaaatcgatgctggaaaagaggcataaccgagct
cccgcgctcaggttcctgatcacgtctctggagagcagaggggcggtggagcgtctgcat
gcagccagccctgtcgagccaggtgaggctctgtccacccagtcagtacagaatctcatg
gctgcctgtgacaccctgagagagagcaccagtgagttcctccgaatgggccacagagag
caagctgctgaagctctcctggagcacgcacaggcattgaggatactggctaaacacact
ggcgatgagggaaaactgcgccacctgctggatgcctactccttcatgcagcaggccgtc
tctgtacaggaacatgtggttctgaacgcccaaagcctgttcccatcacaagagtgtcag
cccttgtctctcccagccacgaggaggctgttgcgggtcagactggctctggctgagctg
tccttaaccatgctggaacaggtgtgtgctgaggagaacagactagctctggcccaggac
aggaaagcctctgtggagaggaccgtggaggagtttgtacgcattacaccagaccccggc
tctgtagagcaggagtggatagctacagggaggaccctggggcaggtggctttgagccag
ctggccacggtcaacttcctgtcccttgactgtgtggagaccagagccagctctctgagc
ctgatggggaagtgcctgaggctgctagccatgcagagagacccgctctaccccttcacc
ctctgggatggacacaacctggaggaggaccggtcagagtctaaagccagccctgaggag
gaggaggagttaaccggagagaatggcctagagtcaagcagaacggagcccagacagtac
gcagccaaatgtgctgagttgcagagaagaagacgttctgcccggcagcttctggctcag
gccagtgagactttagcacaggccatcagcctctccctccaacacaaactcccaagctcc
atcctctcagaagcctgtctcaacatgctggagtgtcacggccagtttgacccctgtgcc
actggtcaatacctggccttgctccagagctgctcctgcacagctatgatggctgacatt
ctaagatctgcttgcactgacactcgtgtgtcccagctctctgcgctactcaacctacac
agcaacctgctcccttcacaggtggagacccccactagtctgctgaagggagtggaggac
tcactcaatggcctctccaagacctacagccacctgaccatcaacccaagtcacctgagt
cttctgggagagctgccctctaacctgaagatcctgctgcttcagcacacacaagacagg
tcaactctctatggagctttctatgagaggagcaaacttacagagagtcagagagggaag
gccatgcaggtttctggtatgctggtctgtaccagggtcgccaaggttgctgtccagccc
agggccctgcttgatctccgggacagaacacaagccttcaaacgcgagaccaaacacaac
ttcttgaaagaggcgcattggcttggcaatgagggcagggcggggagcgagcgtcacgtt
cacctaaaatcgaactcagaagagaaattggaatctcatttcaaagccattgtacaagaa
atggaggactatttgtgtccaatcctctctcagtttgacttctcatgcttcgggcaccag
acgccatccatatccatcccggagtgcatccggcccaaagacaaggaggagaaagcaggc
ctagataaaggtctagcggtggggtctcctgcagagcttggggagtatgtcgtgctcctg
gctgactggatgctcatggaactacctctggaagcgttggcaatcctgcaagaagagggg
ctgagctctgtatctcgtgacttctcactgcaactcctccacactcgcctgcagagagag
gaaccagttgaaagtgacaacaaaaaggagaccaaaggtggaaagggagccaaggggaag
gtagatcaaagcaaagccatcaaaatggtgccggtcaatcgtgtcttgccccccaacacc
ctcccagtagacacacacaacttcaaatatatcatagacccttacaacgaagaggaatat
gaaggcagcagcctgacagagaggatgaagaggactttggaggcatacagccagcaattc
accccactgtgggagggctttttggggagtgaacgcactcccagtctcgcagagctggag
cagctgctgacaaactgcagtgctttcatcttccatggaatggagcgctttctcgctaac
atcccaccatccaagctggctgccctcaacctttctgagtgccagatggctgtccttttc
gacctcgtccagaacagcgccagcatgctacggcaatccaagctagatgtgcaaaagagt
gatggacacctggccctggagaggcccctggagacagccctgctactcactctgagtggc
gtccgttgtgttctgctcaaccagtggcacagcagcccccagaggaacataaataacatg
gactccgtcatggagaatctcctgagggtaggcctgacctctggccagactgtccatgca
ctgaggaagggagaagtccagagcacagagaaagacacaaacactgcaggatcagatgat
accataggccacgaggattcggtaaatagagatgggaatgcacatgatgctcaaccaaga
ttgaccacttcatcatcagccttcaattgtgtcatctatggactgcctaacttagttatt
acgtga
DBGET
integrated database retrieval system
