Oncorhynchus nerka (sockeye salmon): 115113347
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Entry
115113347 CDS
T07952
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi-like
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
one04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115113347
04082 Neuroactive ligand signaling
115113347
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115113347
Ion channels [BR:
one04040
]
Ligand-gated channels
GABA-A
115113347
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
115113347
NCBI-ProteinID:
XP_029496745
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All DBs
Position
LG28:37436429..37520600
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AA seq
459 aa
AA seq
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MMAVLRSGGRVFIMLLISRMLENSLLSAEVKEGEILPPTIQKLMKGYNKYLRPFFDNGPV
TVGMSLDVASIDTISEINMDYTATIFLRQRWTDERLVFEGNKSLSLDGRLVELLWVPDTF
IVDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTKYPMDKQTCTLQLESW
GYNTNDVMFYWTRGNESVSGLDTLRLAQYTVEDHYTSASEAIYETGHYPKLIFHFELKRS
ILYFILETYVPSSLLVVLSWVSFWISQSSVPARVCIGVTTVLTMTTLMMGARTSLPNANC
FIKAIDVYLGICFSFIFGALIEYAVAHFCTLNHPDANIVMYGHQMGGFDEEMNGMVTTIA
AENNRAKRRKEKAAAVSAPMAELELGPSSPTVSEPKPESPEEPPNRCLTVLVLLRKFLRK
AANCCHVENPHLIDNYSRMTFPLSFVFINLLYWTYYLYL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgttctccgctctggaggaagagtgttcatcatgctcctcattagcaggatg
ttagagaactcactgctcagtgctgaagtaaaggagggagagattctgcctcccaccatt
cagaagctgatgaaaggatacaacaagtacctcaggcctttctttgacaatgggccagtg
actgtgggcatgagtttggacgttgccagtattgacaccatatcagagatcaacatggac
tacacggccaccatcttcctgcgtcagcgctggacagacgagcgcctggtgtttgagggg
aacaaaagcctgagtctggacggcaggcttgtggagctgctctgggtaccggacaccttc
atcgtagactccaagaagtccttcctccatgacatcactgtggagaacaggctgatcagg
atcttccccaatggaacagtgctctacgccctgaggatcaccaccactgtggcctgcaac
atggatctgaccaaatatcccatggacaagcaaacctgcactctgcaactggagagctgg
ggctacaacaccaacgatgtgatgttctactggaccagagggaacgagtcggtcagtggt
ttggacacgctgcgtctggcccagtacacagtagaggaccactacacctctgcgtctgag
gccatctatgaaacaggccactaccccaagctgatcttccactttgagctgaagagaagc
atcctgtacttcatcctggagacgtatgttccctctagcctgctagtggtcctgtcctgg
gtgtccttctggatcagccagtcttccgtccccgcaagggtctgcatcggagtgaccacg
gttctgaccatgaccacgttgatgatgggtgccaggacgtccctgcccaacgccaactgt
ttcatcaaggccatcgatgtgtacctgggcatctgcttcagcttcatcttcggagccctg
atcgagtacgccgtggcccacttctgcaccctcaaccaccccgatgccaacattgtcatg
tacggtcatcagatgggaggctttgacgaggagatgaacggaatggtcactaccatcgcc
gctgaaaacaatagggccaagaggcgtaaggagaaagctgctgcagtctcagcgcccatg
gcagagctggaactgggcccatccagccccactgtcagcgagcccaagcccgagtctcct
gaggagccccccaatcgctgcctcactgtcctggtcctcctccgcaagttcctgcgcaaa
gctgcaaactgttgccatgtggagaatccccacttaatagacaactactccaggatgacc
ttccccctctcctttgtattcatcaacctcctctactggacatactacctgtacttgtaa
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