Oncorhynchus nerka (sockeye salmon): 115113356
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Entry
115113356 CDS
T07952
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 3-like isoform X1
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04114
Oocyte meiosis
one04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
115113356
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
115113356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115113356
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115113356
Factors involved in mRNA localization
Trans-acting binding proteins
115113356
mRNA cycle factors
P-body specific factors
115113356
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
zf-U1
Motif
Other DBs
NCBI-GeneID:
115113356
NCBI-ProteinID:
XP_029496758
LinkDB
All DBs
Position
LG28:complement(38462795..38532089)
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AA seq
651 aa
AA seq
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MKIHIWLQNTSYCAQQTMQDDLLMDKNKAQPHQQQDPTVEPPSTPTPSEPPTSEESPSSV
SNQAASALNKEKVLMESPILPGLNFHQPQETGGTLSPSFGSTWSTGTTNTVDDNFFQGIP
SVNGTMLFQNFPHHVNPVFGGNFSPQLGLAQSQQQAQQQQQPPPQQRRSPVSPNQGPFPQ
RNAYSHQSVMNSKASSPASSSGWNNHQNTAWSTASNPWSGLQAGRDPRRAVGVGVGVGVG
VGVPSSMNPISPMKKPYSSNVIAPPKFPRAGPLTPKSWMEDNAFRTDNSNNMMPFQDRNR
PFDAFSLHSLENSLMDMIRTDHDKGRMGLNFHHPGADHIMPLNTRSYGRRRGRSSLFPFE
DGFLDDGHGDPSLTPGLNSPTRCQNGERMERYSRKVFVGGLPPDIDEDEITNSFRRYGHL
VVDWPHKAESKSYFPPKGYAFLLFQEEASVQALIDACIEEDGKLYLCVSSPTIKDKPVQI
RPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPEL
KYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMCDECQGARCGGK
FAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHVSFRWS
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgaagatacacatatggctacagaatacttcatattgcgctcagcaaaccatgcaggat
gatttactgatggacaaaaacaaagcccaacctcatcagcagcaagatccaaccgtagaa
cctccctccaccccgaccccctcggaaccccctacatcagaggagagcccatccagtgtg
agcaaccaagcagcttcagctctcaacaaagagaaagtgctgatggagtctccgatcctg
ccgggtttaaattttcatcagccgcaggaaaccggtggcaccctgtccccctcatttggt
agcacttggtccactggaaccacaaacaccgtggacgacaatttttttcaaggaataccc
tcagtgaacggaacaatgcttttccagaacttcccccatcacgtcaatccggtatttgga
ggcaatttctcacctcagcttggcttggcacagtctcagcagcaagcccaacaacagcag
cagccaccgccgcagcaacggagatcccctgttagccccaaccaaggtccttttccacag
agaaacgcatacagtcaccagtctgtcatgaatagcaaggcttcttcacctgcctcatct
tcgggttggaataatcaccagaataccgcttggagcacagcctccaatccttggagcggt
ctccaggcaggcagggacccgcggagagctgtaggagtcggggttggcgtgggggtcggt
gtaggggtgccgtcttccatgaaccccatctccccgatgaaaaagccatattccagcaat
gttatagcacccccaaaattcccgagagctggtcccctcaccccgaaatcctggatggag
gacaacgcctttaggacggacaacagcaacaatatgatgccttttcaggaccggaatcgg
ccctttgatgcatttagcttgcactctttggaaaattccttaatggatatgataaggact
gaccatgacaaaggacgtatgggtctgaactttcaccaccccggagcagatcacatcatg
ccattgaacaccaggagctatggccgcagaagaggtcgctcttcactctttccgttcgag
gacggtttcctggacgacgggcacggtgacccctctctgaccccggggttgaactcgccc
acacgctgtcaaaacggcgagaggatggagcgctactccaggaaggtgttcgtcggaggc
cttccccctgacatagatgaagatgagatcaccaacagcttccgtcgctatggacacctg
gtggtggattggccccacaaagccgagagcaagtcctactttccacctaaaggctatgcc
ttcttgctgttccaagaggaggcctctgtccaggccctgattgacgcctgcatcgaggag
gacgggaagctttacctttgtgtctccagccccactatcaaggacaaaccagtccaaatc
cgcccctggaacctgagtgacagtgactttgtgatggatggctcccaaccgctggacccc
cgcaagactatatttgtggggggggtgccccggcctctacgcgcagtggaactagctatg
atcatggacaggctgtatgggggtgtgtgctacgccggcattgacactgacccggagctc
aagtaccccaagggggcgggccgtgtggccttctccaatcagcagagctacatcgctgcc
atcagcgcccgatttgttcagttgcagcacaacgacattgacaaacgggtggaggtgaag
ccgtacgtcctggacgatcagatgtgtgacgagtgccagggggcgcgctgtggggggaag
tttgcccccttcttctgtgccaacgtcacctgcctgcagtactactgtgagtactgctgg
gccagtatccactcccgggcgggccgagagttccacaagccactggtgaaggaggggggc
gaccgccctcgacacgtgtccttccgctggagctga
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